Tc07v2_t006610.1

Overview
NameTc07v2_t006610.1
Unique NameTc07v2_t006610.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2667
Properties
Property NameValue
NotePutative Probable disease resistance protein At5g63020
Model evidenceSupporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Productprobable disease resistance protein At4g27220, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593891
GenbankXM_018124991.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g006610Tc07v2_g006610Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p006610.1Tc07v2_p006610.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto366496auto366496Theobroma cacaoexon
exon-auto366497auto366497Theobroma cacaoexon
exon-auto366498auto366498Theobroma cacaoexon
exon-auto366499auto366499Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto366500auto366500Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t006610.1 ID=Tc07v2_t006610.1|Name=Tc07v2_t006610.1|organism=Theobroma cacao|type=mRNA|length=2667bp
ATGGAGACTGTTGGGAATATGGTTGTTAAATACTGGGACAACCATAGAAG
TCTTGATCAGAAAATGATTGACCTAAAAAGAAAATTGGTTGATTTAAATG
CCCTGAAGCAAGACGTTGAATCAAGAAAGAGGGCAGAGCTGCATCCGAGG
AAGAAACTGAAGTCACAAGTTGATGTATGGTTCCGAAATGTTGAAAGAAT
AAATGATGAGATACAAAACCTTGATCAAAGAGTTGCGCAAAGCATTTCCA
TCTCACGTGGATTTTGCATGGAAGATGTTTTAAAAAAGATACAAGAAGTT
GAGGAGCTTCTTCAACAGGGTAAGTTTGATCAAGGTTTGGTAGTCGATGA
CCTTATGTGGATTGGACAAGCTTTGTCAACAACAAATTTAGTTGGGAAAG
CTGCAGAGATCTGTATGGAAGAAATTTGGACATGCTTGATGGATGATGAT
ATTGGAAAGATTGGTGTTTGGGGAATGGGAGGATTAGGTAAAACAACAAT
CATGAAGCTCATCAACAACCAACTCTTAAAAAAGACTGAAAAGTTCAACA
CTATTATATGGATCACCGTATCAAAGGAGATGAACATCTCCAACATTCAA
AAAGGCATCTTACGTGCAATGAGAGAAAAGCTTCATGAAGATGAGGATGA
AACTATAAGGGCAGGAATGTTAAATGAAATGTTGACTCGAAGGGGCAGGT
ATGTTTTAATTTTAGATGATCTATGGGACAAACTTTCTCTTGAAGAAGTA
GGAATCCCCGACCTTTCTAACGGGAGTAAGTTAGTGGTAACGACTCGGAT
GTTGGATGTGTGTCGCTATTTGGGTTGTCGAGAAATTAGAATGCCTACTC
TTCCAAAACAAGATGCGTGGAGTTTGTTTTTGGAGAAAGTAGGTAGAGAT
GTTCTCAAATATCCAGATCTGTTCCCAATTGTGGAATCCGTTGTTGAACA
ATGTGCTGGTTTGCCGTTAGCTATAGTTACAGTAGCTAGCAGTATGAAGG
GCATAACAAATGTTCATGAATGGAGGAATGCACTAAATGAATTAAGTCGA
CGTGTAAGAGGTGTGACTGGGTTAGATGAAAAGGTACTTCAGCAACTCCA
ATTTAGCTATGACCATTTAGAACATGAAAGAGTCCAGCATTGCTTCCTCT
ATTGTGCATTATATCCCGAAGATTATAGTATCCATGAAAGGATACTAATA
GAACTTTGGATTGCCGAGGGGCTTGTGGAAGAAATGGATAGCCAACAAGC
AGAGCTTGATCAGGGGTATACCATATTGAATGAACTCAAAAATAATTGCT
TGTTAGAAAATTGTGAATATCCAGAACTTGTGAAGTTGCATGATCTTGTG
AGAGACATGGCGCTACGAATCACGAGACCACGGTTCCTAGTAAGAGCCGG
CTTGCAATTGAAAGAGATACCACATGTGCAAGAATGGACAAAAGATTTAG
AAAAGGTTTCATTGATGAGTAATTATGGCTTGCAAATTCCATCACAAATG
TCACCACCAAACTGCCAGATGCTCACAACTTTATTGTTGTCTGATTGTGG
TATAAAGAGTATTCCAGATTGTTTCTTTGAGCAAATGAAGGGACTCAAAG
TTCTTGACCTTTCCGGGAATAATTTTAGAATTTTACCAAGTTCCATCTTT
AACTTGGAAGCTCTCACTGTGTTATTGGTAAGAAGATGTGATTATTTAGA
AGAGGTGCCATCTTTCTCAAAACTTGAAGCTTTAAAGAAGTTGGATCTTT
CAGGTAGAGCAATCAACTATGTCCCGCGTGGAATATTTCCAAAATTTTCA
TGCTTGCGGGACCTGGTGATATTTGATGACGATCAACCAGTATGTGTTAG
AGGAGAAGAGATAGGTGAGTTAAGGAAGTTGCTCTACTTTAAAGGGTGGT
TTTATGACTTGAATGAATTGAATACTTTTGTGCAAACTTCGCAGAGTCGA
GGACAACGGCTTATTCGATACTACGTGGTTGTGGGTCTTAAAAAAATCCC
TAATGACAGCCCATGGGATAAATACATTGAATTATCTGGTTGTAAGATCT
GTAGAAATGGTGTCAAGTTCCCATCCGATCTTCAGCAATTGAGAATTAAC
TATGGCATTGTTGATTTCCCAGAAGAAGAGGTGTTTTTTCCATGTTTTAT
CCCAACGCCAAATGGCATGTTTTCTTTTCTTAAAGAAATTTATATATTTA
GATGTGAAAAAATAAAAAAGTTGTTCACGTGTAGTTGGGTGCTAAGTAAC
CTCCCAAATTTGGAAGTGTTAACTGTTGAGATATGTCACGGCATGGAGGA
AATAATAGCATCAGAAATGGAATTCGTTGAAGAAGAAAGAATGGGTGGTA
GTAACAGTAATACCATCCAATTCACTCTTCCCAAATTAAGGAAATTGGAC
TTGAGGTTGTTACCGGATCTGAAAAGTATTTGTGGTGCAAATAGAGTAAT
GGTGTGTGATTCTATTGAAAAGATTACAATCGATCATTGTCCAAAATTGC
AGAGGATTCCTCTGTATCTTCCACTACTTGATGATGGCCAACCATCTCCT
CCTCCCTCTCTTAAGGAATTCTTTATATCTTCAAGGGAGCAGTTGAGATC
GGCGGAGTGGGATCATCCCAATGCCAAGTCTGTACTGGAGCCATTTATTA
CGCACTGGAGGCTCTGA
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protein sequence of Tc07v2_p006610.1

>Tc07v2_p006610.1 ID=Tc07v2_p006610.1|Name=Tc07v2_p006610.1|organism=Theobroma cacao|type=polypeptide|length=889bp
METVGNMVVKYWDNHRSLDQKMIDLKRKLVDLNALKQDVESRKRAELHPR
KKLKSQVDVWFRNVERINDEIQNLDQRVAQSISISRGFCMEDVLKKIQEV
EELLQQGKFDQGLVVDDLMWIGQALSTTNLVGKAAEICMEEIWTCLMDDD
IGKIGVWGMGGLGKTTIMKLINNQLLKKTEKFNTIIWITVSKEMNISNIQ
KGILRAMREKLHEDEDETIRAGMLNEMLTRRGRYVLILDDLWDKLSLEEV
GIPDLSNGSKLVVTTRMLDVCRYLGCREIRMPTLPKQDAWSLFLEKVGRD
VLKYPDLFPIVESVVEQCAGLPLAIVTVASSMKGITNVHEWRNALNELSR
RVRGVTGLDEKVLQQLQFSYDHLEHERVQHCFLYCALYPEDYSIHERILI
ELWIAEGLVEEMDSQQAELDQGYTILNELKNNCLLENCEYPELVKLHDLV
RDMALRITRPRFLVRAGLQLKEIPHVQEWTKDLEKVSLMSNYGLQIPSQM
SPPNCQMLTTLLLSDCGIKSIPDCFFEQMKGLKVLDLSGNNFRILPSSIF
NLEALTVLLVRRCDYLEEVPSFSKLEALKKLDLSGRAINYVPRGIFPKFS
CLRDLVIFDDDQPVCVRGEEIGELRKLLYFKGWFYDLNELNTFVQTSQSR
GQRLIRYYVVVGLKKIPNDSPWDKYIELSGCKICRNGVKFPSDLQQLRIN
YGIVDFPEEEVFFPCFIPTPNGMFSFLKEIYIFRCEKIKKLFTCSWVLSN
LPNLEVLTVEICHGMEEIIASEMEFVEEERMGGSNSNTIQFTLPKLRKLD
LRLLPDLKSICGANRVMVCDSIEKITIDHCPKLQRIPLYLPLLDDGQPSP
PPSLKEFFISSREQLRSAEWDHPNAKSVLEPFITHWRL*
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