Tc07v2_t006600.1

Overview
NameTc07v2_t006600.1
Unique NameTc07v2_t006600.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2730
Properties
Property NameValue
NotePutative Disease resistance protein At4g27190
Model evidenceSupporting evidence includes similarity to: 2 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Productprobable disease resistance protein At4g27220
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593886
GenbankXM_018124989.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g006600Tc07v2_g006600Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p006600.1Tc07v2_p006600.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto366490auto366490Theobroma cacaoexon
exon-auto366491auto366491Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto366492auto366492Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t006600.1 ID=Tc07v2_t006600.1|Name=Tc07v2_t006600.1|organism=Theobroma cacao|type=mRNA|length=2730bp
ATGGATTTTGTTCTAAATAAGGTTGATAAACACTGGGACAACCATAGAAG
CTTTGACCAGAACCTGATTACCCTAAAAAGAAAACTGGAGGGTTTAAATG
CCCTAAAGGAAGACACTGAATCAAGAATGAGACCAGAGTTGCTTCCGAGT
AAGAAACTCAAGAAAGAAGTTCATTTATGGTTGAAAAATATTGAAAGAAT
TAATGGTGAAATACAAAACCTTGAACAAAGAGTTGAGAAAACCCCTATTT
TCTTATGTGGATTTCACACAGAAAATGTTTTAAAAAAGATACATGAAGTT
GAGGAACTTCTTCAACAGGGTAGGTTTGATCAAGGTTTGGTAGTTGATGA
ATTTACATGGATTGGACAAGCTTTGGCAACAACAACTTTAGTTGGAAAAG
CTGCAGAGATCTGTTTGAAAGAAATTTGGACATATTTGATGGATGATGAT
ATTGGAAAGATTGGTGTTTGGGGAATGGGAGGAGTGGGGAAAACAACCAT
AATGAAGATTATCAACAACCAACTTTTAAAAGAGACTGAAAAGTTCAAGA
TTGTGATATGGATCACCGTATCAAGGGAGATCAATATCTCCAAAATTCAA
AACGGCATCTCACGTAAAATGGGAGTACCCCTTCCTGAAGATGAGGATAA
AACAATAAGGGCAGGAATGCTATACGAATTGTTGACTCGAAAAGGCAGGT
ATGTGTTAATTTTGGATGATCTATGGGACACACTTTCTCTTGAAGAATTA
GGAATCCCTCAGCCTTCTAATGGGAGTAAGTTAGTGGTAACAACTCGGAT
GCGGGATGTGTGTCGCTATTTGAGTTGTCGAGAAGTTAAAATGCCTACTC
TTCCAAAACAAGATGCATGGAGTTTGTTCTTGGAGAAAGTAGGTCAAGAT
GTTTTGGAATATGAAAACCTGTTACCAATCGTGAAATCTGTTGCTGAGCA
ATGTGCTGGTTTGCCGTTAGCTGTAGTTACAGTAGCTAGCAGTATGAAGG
GCAAAAGAGATATTCATGAATGGAGGAATGCACTAAATGAATTAAGTAGA
CGTGTAAAAGGTGTGACTGGGTTAGATGACATGGTATTGCGGCAACTCCA
GTTTAGCTATGATCATTTAAAAGAAAGAGTCCAGCATTGCTTCCTTTATT
GTGCACTATATCCCCGAGATTGGAATATCTCTGAATTTGAACTAATAAAA
CTTTGGATTGCTGAGGGGCTTGTAGAAGAGATGGATAGCCAAAAAGCAGA
GCTTGATCAGGGGTATACCATACTGAATAAACTCAAAAATAATTGCTTGT
TAGAAAATGGTGAATCTATCCGATGTGTGAAGTTGCATGACCTCGTGAGA
GACATGGCACTACGCATCACGAGACCACAATTTCTGGTACGAGCCGGCTT
GCAATTAAAAGAGATACCTCATGAGCGCGAATGGATAGAAGATTTGGAAA
AGGTTTCATTGATGTTTAATTCTCACTTGCAAATTCCATCACAAATATCA
CCACCGAAATGTCAGATGCTGACAACTTTATTGTTGTCCTTTTGCTATAT
AAAGAGTATTCCAGATTGTTTCTTTGAGCAAATGAAGGGACTCAAAGTTC
TTGACCTTTCTTTCAATAGTATTAAAAGTTTGCCAAGTTCCATCTCTAAT
TTGGAAGCTCTCACTGTATTATTGGTTAAAGGATGCCCTCCTTTAGAAAA
GTTGCCATCTTTCTCAAAACTTGAAGCTTTAAAGAAGTTGGATCTTAAAG
ACACAAAAATCAAGAATCTTCCGCATGGGGTGGAAAGGTTGGTAAATCTC
AATTATCTTCATCTGGATGTGGAAGAAGTCCCCAGTGGTATATTATCAAA
ATTATCATGCTTGCGAGACTTGGTGATAGTTGATAACCATAAACCGCATC
AAGCATGCGTCAAAGGAGATGAGATAGGTGAGTTAAGGAGGTTGGAGTAC
TTTAAAGGGAGGTTCTATGACATGAATGAATTGAATACTTTTGTGCAAGC
TTTGCAGAGTCGAGGACAACAACTTAATGGATACCACATTGGTGTGGGTG
ATGAAAAAGTCTACACTCAACACAAATCGGAAAAACACGTTGAATTAGAT
GGTTGTAAAATCTGTAGAGATGGTGTTGAGTTCCCTTCCGATCTGCAGCA
CTTGAGTATTAACCACGGCATTATTGATTTCCTTGAAAAGGAGGCGTTTT
TTCCATGGTTTATCTCAGCACCAAAAGGCATGTTTTCTTGTCTTAAAGAA
ATTTATATTTTTGAATGTGAAAAAATAAAAAAGTTGTTCACGCGGAGTTG
GGTGCTAAAGAACGTCCCGAATTTGGAAGTGTTAACTGTTTGGGGATGTG
ACCAAATGAAGGAAATAATAGCATCAGAAATGGAATTCGTTGAAGAAGAA
GGAATGGGTGGTAGTAACAGTAATGCCATCCAACTTACTCTTCCCAAATT
AAGGATATTGAAATTGTTGTATTTAGCACAACTGAAAAGTATTTGTAGTG
CAAATAGAGTTATGGTTTGTGATTCTCTTGAAGAGATTATTATCCATTGC
TGTCCAAAATTACAGAGGATCCCTCTGTATCTTCACCTGCATGATGCTGG
CCAAGCATCTCCTCCTCCATCTCTTAAAGGATTGGCTATAACTTCAAAGG
AATATTGGGAGTCGCTGAAGTGGGACCATCCCAATGCCAAGTCTCTATTT
AAGCCAAAGTTTTTAAGCTGGAGCCTCTGA
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protein sequence of Tc07v2_p006600.1

>Tc07v2_p006600.1 ID=Tc07v2_p006600.1|Name=Tc07v2_p006600.1|organism=Theobroma cacao|type=polypeptide|length=910bp
MDFVLNKVDKHWDNHRSFDQNLITLKRKLEGLNALKEDTESRMRPELLPS
KKLKKEVHLWLKNIERINGEIQNLEQRVEKTPIFLCGFHTENVLKKIHEV
EELLQQGRFDQGLVVDEFTWIGQALATTTLVGKAAEICLKEIWTYLMDDD
IGKIGVWGMGGVGKTTIMKIINNQLLKETEKFKIVIWITVSREINISKIQ
NGISRKMGVPLPEDEDKTIRAGMLYELLTRKGRYVLILDDLWDTLSLEEL
GIPQPSNGSKLVVTTRMRDVCRYLSCREVKMPTLPKQDAWSLFLEKVGQD
VLEYENLLPIVKSVAEQCAGLPLAVVTVASSMKGKRDIHEWRNALNELSR
RVKGVTGLDDMVLRQLQFSYDHLKERVQHCFLYCALYPRDWNISEFELIK
LWIAEGLVEEMDSQKAELDQGYTILNKLKNNCLLENGESIRCVKLHDLVR
DMALRITRPQFLVRAGLQLKEIPHEREWIEDLEKVSLMFNSHLQIPSQIS
PPKCQMLTTLLLSFCYIKSIPDCFFEQMKGLKVLDLSFNSIKSLPSSISN
LEALTVLLVKGCPPLEKLPSFSKLEALKKLDLKDTKIKNLPHGVERLVNL
NYLHLDVEEVPSGILSKLSCLRDLVIVDNHKPHQACVKGDEIGELRRLEY
FKGRFYDMNELNTFVQALQSRGQQLNGYHIGVGDEKVYTQHKSEKHVELD
GCKICRDGVEFPSDLQHLSINHGIIDFLEKEAFFPWFISAPKGMFSCLKE
IYIFECEKIKKLFTRSWVLKNVPNLEVLTVWGCDQMKEIIASEMEFVEEE
GMGGSNSNAIQLTLPKLRILKLLYLAQLKSICSANRVMVCDSLEEIIIHC
CPKLQRIPLYLHLHDAGQASPPPSLKGLAITSKEYWESLKWDHPNAKSLF
KPKFLSWSL*
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