Tc07v2_t006270.1

Overview
NameTc07v2_t006270.1
Unique NameTc07v2_t006270.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1146
Properties
Property NameValue
NotePAP-specific phosphatase HAL2-like
Model evidenceSupporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
ProductPAP-specific phosphatase HAL2-like
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593851
GenbankXM_007021243.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g006270Tc07v2_g006270Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p006270.1Tc07v2_p006270.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto366012auto366012Theobroma cacaoexon
exon-auto366013auto366013Theobroma cacaoexon
exon-auto366014auto366014Theobroma cacaoexon
exon-auto366015auto366015Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto366016auto366016Theobroma cacaoCDS
CDS-auto366017auto366017Theobroma cacaoCDS
CDS-auto366018auto366018Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t006270.1 ID=Tc07v2_t006270.1|Name=Tc07v2_t006270.1|organism=Theobroma cacao|type=mRNA|length=1146bp
ATGGAGGAGGGGGACAAGTATGGTAAAGAGTTGGATTTGGCTGTTAGAAT
TGTGCATATGGCTTGTTCTTTGTGTCAGAAAGTGCAACAAAGGTTGGTTT
CTTCGTCTGCTGAACAGGTTTTGGCTAAGGATGATGATTCTCCTGTTACT
ATTGCAGACTGGAGTGTCCAAGCCACTGTAAGTTGGCTGCTTTCAGAATT
CTTGGAGGGGCAGAATGTGTCCATTGTTGCTGAGGAAGATGTCCAAACAC
TCTCCAAGTCTGATGCAGCAGACTTACTTGCAGCTGTAGTGAACTCTGTT
AATGAATGCTTAGCTGAAGCGCCAAAGTATGGTCTTCAGTGTCCTAGGGA
TGCTCTTGGGACTTCAAAAATCCTTGAGGCTATCAGCCGATGCAACTCAA
CTGGGGGCCCAACTGGAAGACATTGGGTGCTTGACCCTGTTGACGGGACA
TTAGGATTTGTACGTGGTGATCAGTATGCTGTAGCACTAGCCTTGATTGA
GGAGGGGAAGCTAGTTCTTGGAGTTCTTGGGTGCCCTAATTACCCTATGA
AAAAGGAATTGTTAAATTATAATCATCAGCGCCACCAAACTATGCCAAAG
TCTCTTCCACCTTCTGATATTTGGGAAAAAGGATGTGTGATGTATGCAAG
GAGAGGAAGTGGTCAGGCATGGATGCAACCATTGATCCACAGGGATACAA
AATTTGAATGGCCAAATTCTGCTAGATTGATACAGGTTTCTCCTGTTGAT
GATCCATCTCTGGCAACTTTTTGTGAACCTGTGGAGAAGGCAAATTCAAA
CCACTCATTTACCGCAGGACTTGCTAACAGCATGGGTCTCAAAAAGAAAC
CTATGCGTGTCCATAGCATGGTCAAATATGCAGCAATAGCTCGTGGCGAT
GCTGAGATTTTTATAAAGTTTGCAAGATCTGGGTACAAAGAGAAAATATG
GGACCATGCTGCTGGTGTTGTCATTATAGAAGAGGCTGGTGGGGTCGTAA
CTGATGCAGGAGGGCGTCCCCTGGACTTCAGTAGGGGACTGTACTTGGAA
GGTCTTGACCGAGGGATTATTGCTTGCTCTGGACTGACGCTGCATGATAA
AATCATTGGTGCTGTATATGCAAGCTGGGACTCTTCTAATCTATGA
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protein sequence of Tc07v2_p006270.1

>Tc07v2_p006270.1 ID=Tc07v2_p006270.1|Name=Tc07v2_p006270.1|organism=Theobroma cacao|type=polypeptide|length=382bp
MEEGDKYGKELDLAVRIVHMACSLCQKVQQRLVSSSAEQVLAKDDDSPVT
IADWSVQATVSWLLSEFLEGQNVSIVAEEDVQTLSKSDAADLLAAVVNSV
NECLAEAPKYGLQCPRDALGTSKILEAISRCNSTGGPTGRHWVLDPVDGT
LGFVRGDQYAVALALIEEGKLVLGVLGCPNYPMKKELLNYNHQRHQTMPK
SLPPSDIWEKGCVMYARRGSGQAWMQPLIHRDTKFEWPNSARLIQVSPVD
DPSLATFCEPVEKANSNHSFTAGLANSMGLKKKPMRVHSMVKYAAIARGD
AEIFIKFARSGYKEKIWDHAAGVVIIEEAGGVVTDAGGRPLDFSRGLYLE
GLDRGIIACSGLTLHDKIIGAVYASWDSSNL*
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