Tc07v2_t006040.1

Overview
NameTc07v2_t006040.1
Unique NameTc07v2_t006040.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length459
Properties
Property NameValue
NoteUncharacterized protein
Model evidenceSupporting evidence includes similarity to: 12 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productuncharacterized LOC18593827
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593827
GenbankXM_007021214.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g006040Tc07v2_g006040Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p006040.1Tc07v2_p006040.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto365764auto365764Theobroma cacaoexon
exon-auto365765auto365765Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto365766auto365766Theobroma cacaoCDS
CDS-auto365767auto365767Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t006040.1 ID=Tc07v2_t006040.1|Name=Tc07v2_t006040.1|organism=Theobroma cacao|type=mRNA|length=459bp
ATGGGTATATGGGACTTCATTTCTTGGTCAACTGACTCAATCAAGGGCCT
TTGGCAGAGCTCTTATGATCATAGTCGCGCAGCGGTCACCAAGGTCGACA
GTGTAAGAATTGATGCTGTGGAAAAGGTGAGCCAGCACTTGTCTGATCCT
GAAACCCGGTCAAAAATATCCAGGGTAGCAACCGATGTTGCCATGAATGC
TACCATCGAGGGCCTCAAAGTAATCCCTGGTGCATTTCCAACTTATAAAA
TTGTCTCGGAATCATTACATGATGACAAGAAGTCAATGAATGAGAACAAG
TCCAAGGAACAGGAAGAAGGTTTGAAGGCATTGCAAGCGACAGTAAGCAG
ACTGGAGAAAGAAGTCAGTGATCTGCGTGAGCAAGCAGGGATCCAACAGC
ATGCTGTTGAGACAAAGCCTCAAAACACAAACTCGGCTGATCCGAAACCA
AAGATATGA
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protein sequence of Tc07v2_p006040.1

>Tc07v2_p006040.1 ID=Tc07v2_p006040.1|Name=Tc07v2_p006040.1|organism=Theobroma cacao|type=polypeptide|length=153bp
MGIWDFISWSTDSIKGLWQSSYDHSRAAVTKVDSVRIDAVEKVSQHLSDP
ETRSKISRVATDVAMNATIEGLKVIPGAFPTYKIVSESLHDDKKSMNENK
SKEQEEGLKALQATVSRLEKEVSDLREQAGIQQHAVETKPQNTNSADPKP
KI*
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