Tc07v2_t005420.4

Overview
NameTc07v2_t005420.4
Unique NameTc07v2_t005420.4
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length753
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
Productuncharacterized LOC18593753, transcript variant X2
NotePutative Protein synthesis inhibitor II
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593753
GenbankXM_018125048.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g005420Tc07v2_g005420Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p005420.4Tc07v2_p005420.4Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto364629auto364629Theobroma cacaoexon
exon-auto364630auto364630Theobroma cacaoexon
exon-auto364631auto364631Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto364632auto364632Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t005420.4 ID=Tc07v2_t005420.4|Name=Tc07v2_t005420.4|organism=Theobroma cacao|type=mRNA|length=753bp
ATGGCAGATGGGCATACTTCAATTGCTTTCAATGTTGATGAAGGTGATTA
CCAGACATTTATCCAAAGCCTAAGATCTATACTTTCAAGCTCCACATCAC
ATAATATCGATGTGCTCATGCCACAAACACATTCTCTAAGTTGGTTAGAT
ATTCGCCTAACTTCTGGTGCTTCCACCATCATCTTGAGAATTGACAAGAG
AAATCTATACGTGCGTGGATATTCAAGAGATGAAGGTGCAAAATTTTGGG
AGTTTTCGGATTCATCTATGATTTCTGGATCGAGCCCTCTCGCATATGCA
GGAAGCTATGTAGATGGTTACACCTTCATTGATGCTGCCGGACAAGATGT
TACTCGTGAAACACTTCAGCTAGGTTTACCTAATTTAAGCAATGCCATTG
CCAACTTAGCAAGAGCGTTGGACCCGAACTCGACCCAAAATAATGCATTG
CAGAATTGTGCTAGAGCACTGCTGGTTTTAACTCAAATGATTGCCGAATC
TACGAGGTTTCAATTAATCACGGACCACATTGTCAAAAACTGGTACAATT
CTGCACCACTCACTTCACAACTCGTCGAGTTGCAGCAGGGCTTTGTAAGT
TTTTCTAGTGCTGTCCAACGTGCTGACCTCCCCTGGACAGATAATACGCC
CTTGCCTAACGTCCCGAACCCTAATAGAGCCCAAATTTGGACCGTAGGTC
AGGCCATTGCCGCACTTGGGATCTTGATGGAGACAAGACCCGTGACAAGC
TAA
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protein sequence of Tc07v2_p005420.4

>Tc07v2_p005420.4 ID=Tc07v2_p005420.4|Name=Tc07v2_p005420.4|organism=Theobroma cacao|type=polypeptide|length=251bp
MADGHTSIAFNVDEGDYQTFIQSLRSILSSSTSHNIDVLMPQTHSLSWLD
IRLTSGASTIILRIDKRNLYVRGYSRDEGAKFWEFSDSSMISGSSPLAYA
GSYVDGYTFIDAAGQDVTRETLQLGLPNLSNAIANLARALDPNSTQNNAL
QNCARALLVLTQMIAESTRFQLITDHIVKNWYNSAPLTSQLVELQQGFVS
FSSAVQRADLPWTDNTPLPNVPNPNRAQIWTVGQAIAALGILMETRPVTS
*
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