Tc07v2_t005240.9

Overview
NameTc07v2_t005240.9
Unique NameTc07v2_t005240.9
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2910
Properties
Property NameValue
NotePutative Probable disease resistance protein At4g27220
Model evidenceSupporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Productprobable disease resistance protein At4g27220, transcript variant X4
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593741
GenbankXM_018124972.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g005240Tc07v2_g005240Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p005240.9Tc07v2_p005240.9Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto364218auto364218Theobroma cacaoexon
exon-auto364219auto364219Theobroma cacaoexon
exon-auto364220auto364220Theobroma cacaoexon
exon-auto364221auto364221Theobroma cacaoexon
exon-auto364222auto364222Theobroma cacaoexon
exon-auto364223auto364223Theobroma cacaoexon
exon-auto364224auto364224Theobroma cacaoexon
exon-auto364225auto364225Theobroma cacaoexon
exon-auto364226auto364226Theobroma cacaoexon
exon-auto364227auto364227Theobroma cacaoexon
exon-auto364228auto364228Theobroma cacaoexon
exon-auto364229auto364229Theobroma cacaoexon
exon-auto364230auto364230Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto364231auto364231Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t005240.9 ID=Tc07v2_t005240.9|Name=Tc07v2_t005240.9|organism=Theobroma cacao|type=mRNA|length=2910bp
ATGGATTGGATATTGTCATTTGTTGAAGTGATAAGGAGCTTTGGGGGTCC
ATACATAAATCATCATTGGAAACTTGAAGATTATATGAATGAGCTTCGAG
GAAATGTGAATAGTCTAAATTCTCGAAAGCGAGACCTCGAATTAAAAATG
GAAGCAGAGGATCGTTGCGGGAAAAAGATGAAGAAAGAAGTGGAGAACTG
GCTCAAAGATGTAGAAAAGGTCGGCAATGAAGTCAAAAACATTGAAGAGG
AGTTCCCTTCTGTTTCATTCTTGTCACGTGGCCGTCTAGGAAGTTTTGTT
TGCCAAACTATTGAAAACGTAAACAAAATTTACCAACAAGGTAGTTTCCT
TGACGGTGTGGCAGTTGATGGGCCTCCAGCCACCGGGGTGACATTACTAA
CATCAAATCTAGAAGGTGAAATCAATGTAAAAGAACAAATTTGGAAGTAT
TTGATGGGTGATGAGGTTGGAATGATTGGAGTATGTGGAATGGGTGGTAT
AGGGAAAACTACCATTATGAAGCATATCAATAATCAGTTGTTGAAGGATA
ATCGGTTTGATCAAGTGATATGGGTCACTGTATCAAAAGAATTGAATATT
TTCAAATTGCAAGAAGATATTGCAAATTCTTTGAAACAAGCTCTTCCAAC
AACTGTATTGCAACGAGCAGCACAATTAAAGAATATTTTGGAGGGAAAGA
GATATGTGTTGATCTTAGATGATGTTTGGAAACGATTTTCTCTATTGGAT
GTGGGAGTCCCTAAACCAACGTTAGGAATGAGGAGGAAAGTTGTACTCAC
TAGTAGATTGATTGAGGTCTGTAAGTCTATGGGTTGTGAGGTGGTCAAAG
TGCAACCACTTTCAAAGAATGAGTCCATGAACTTATTCTTAGATCACGTG
GGGCGTAGAGTTGTACAAGATCAAAATTTAAAGGACATTGTAGACAAAAT
TGTTGAGAAATGTGGCGGTTTACCACTTAGTATTGTGACAATAGCCGGGA
CCATGAAGGAGGTAGATGATTTTTGTGAGTGGAAGAATGCACTAATTGAA
TTAGAAGAGCGTGTGGAAAGTGTGAAAGAATTGGATATCGAAGTATATGA
GCCTTTGAAGTTCAGTTATGACCATTTGAGAGATCCAAAAATTCAAAATT
GTTTCTTATACTGCTCTTTATATCCTGAAGATTTCATAATTAGAAAAGTG
GAATTAATTGAAAATTGGATAGATGAGGGACTCCTTGATGGCTTACAGAC
CAAAGAAGCAATGCATCACAGAGGTTATAGCATTTTAAATAAGCTTGAAA
ATAATTGCCTATTAGAGAGGGTTGGAGATTTTATTGATGGAGTTAAGATG
CATGATGTTTTGAGGGACATGGCGTTGTATATTGCAGGTCATCAGTTCAT
GGGAAAAGCAGGTATGCAATTGAAAGAATTCCCAAGTGAGCAAGAATGGA
CAGTGAGTGTTGAGAAAGTTTCCTTGATGCGAAATTCAATATTAGAAATT
CCTTCTCACATATCACCTAGATGGCCTCATTTATCAACTTTGATATTGCA
AAGTTGTGACTTAAGAAGGATTTCAGAATCCTTTTTTAAGCACATGTCTG
GGTTAAAAGTTCTAGATCTTTCTCGTAATAAAATAGTGAGTCTACCCAAT
TCGATCTCTAACTTGAAAACTCTCAATGCATTGATACTTGCTAAATGTCG
CCAGTTAAAATATGTGCCTTCATTAGCAAAGCTCAGAGCATTGAGAAAGT
TGAACCTTTTGCACACAGGATTTGAAGAGGTTCCTCAAGGCATAGAGATG
TTAGAAAACTTGAGAGATCTTCGTATGGCTTTAAAAGAGCTACCAGTAGG
AATATTACGGAGGATTTGTCATCTCCAATGCTTAATGCTACAGGATACGT
TTGTAAAGGGAGAAGAAGTAGGCCAATTGAGGAAGCTTGAGTGGGTTTCA
TGTTCATTTCGCAACGTGCAAGAGTTTAAGAAATACGCAGAGTGTACACA
AGGTAAATGGCCTACATCTTTCATTTTTCAAGTGGGGGGACCACCTGTGC
AATGGTATATTGGCTTTGGGCGTCCCCCAAATTTCAAAAAAATTGAGAAA
CAGGTTAAATTCAGAGATTCGGAGATAGAGAGGTGTGATGATAGGGTGGT
CCCACATGACCTTCAAACTTTAACTATTGAGAAGTGTGATGATTTCAAAT
GTTTAAACAACATTCCTTTGTTTCGTAAGGCGACTGACTTGAAGGAATGT
CAAATTACGCAGTGTGAAGGGATGGAGTTTGTGGTTGACTTGTCATTATC
GTCTAGCGATGCACTTCACAACATTGAGGAGTTATACCTTAAGGGATTGC
GAAACTTGCGTGAAGTTGTGAGAGTAGGAGTAGGAGTAGGTGTAGCGGTT
GAAATTGAATCTACCTCTCATGCTCCAACACCACCTGCCATCTTCTCTTC
TCTTAAAGAATTCCATATGAGTTTTTGTTCGAGGGTGAAAAAGTTGTTTC
CAGTTGAGCTGTTGCAGGGCCTCCAAAACTTAGAGGAAATTTTCGTTGAA
TGTTGTGAAGAAATGGAGGAATTAATAGCATCAGAAGAAAATCACAAAGG
AGAAGGAACAACATTTATTCTTCCCAAATTAAAATCATTGTGGTTGCAAG
TCTTACCAAAATTGAAAAGCATTTGCAGCGGTGGAGTTATGATTCCTGCA
GATTCTCTCCAAAATCTTGGTATAGTCAAATGTCCAGAAGTAAAGAGGAT
CCCTTTGTCTCTTCCCCTTGTTGAAAATGGGAAATTATCTCCTCCTCCTT
CTTTAGAAAGAATCATAGTAGGCCTGAGAGAATGGTGGGAATCAGTGGAA
TGTGATCAGTCTAATGCTAAGGATGTCCTTTCTCCCTTTGTTCGATATTC
TGAGTGGTAG
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protein sequence of Tc07v2_p005240.9

>Tc07v2_p005240.9 ID=Tc07v2_p005240.9|Name=Tc07v2_p005240.9|organism=Theobroma cacao|type=polypeptide|length=970bp
MDWILSFVEVIRSFGGPYINHHWKLEDYMNELRGNVNSLNSRKRDLELKM
EAEDRCGKKMKKEVENWLKDVEKVGNEVKNIEEEFPSVSFLSRGRLGSFV
CQTIENVNKIYQQGSFLDGVAVDGPPATGVTLLTSNLEGEINVKEQIWKY
LMGDEVGMIGVCGMGGIGKTTIMKHINNQLLKDNRFDQVIWVTVSKELNI
FKLQEDIANSLKQALPTTVLQRAAQLKNILEGKRYVLILDDVWKRFSLLD
VGVPKPTLGMRRKVVLTSRLIEVCKSMGCEVVKVQPLSKNESMNLFLDHV
GRRVVQDQNLKDIVDKIVEKCGGLPLSIVTIAGTMKEVDDFCEWKNALIE
LEERVESVKELDIEVYEPLKFSYDHLRDPKIQNCFLYCSLYPEDFIIRKV
ELIENWIDEGLLDGLQTKEAMHHRGYSILNKLENNCLLERVGDFIDGVKM
HDVLRDMALYIAGHQFMGKAGMQLKEFPSEQEWTVSVEKVSLMRNSILEI
PSHISPRWPHLSTLILQSCDLRRISESFFKHMSGLKVLDLSRNKIVSLPN
SISNLKTLNALILAKCRQLKYVPSLAKLRALRKLNLLHTGFEEVPQGIEM
LENLRDLRMALKELPVGILRRICHLQCLMLQDTFVKGEEVGQLRKLEWVS
CSFRNVQEFKKYAECTQGKWPTSFIFQVGGPPVQWYIGFGRPPNFKKIEK
QVKFRDSEIERCDDRVVPHDLQTLTIEKCDDFKCLNNIPLFRKATDLKEC
QITQCEGMEFVVDLSLSSSDALHNIEELYLKGLRNLREVVRVGVGVGVAV
EIESTSHAPTPPAIFSSLKEFHMSFCSRVKKLFPVELLQGLQNLEEIFVE
CCEEMEELIASEENHKGEGTTFILPKLKSLWLQVLPKLKSICSGGVMIPA
DSLQNLGIVKCPEVKRIPLSLPLVENGKLSPPPSLERIIVGLREWWESVE
CDQSNAKDVLSPFVRYSEW*
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