|
Properties
Property Name | Value |
Note | Putative Probable disease resistance protein At4g27220 |
Model evidence | Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns |
Product | probable disease resistance protein At4g27220, transcript variant X5 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
CDS-auto364215 | auto364215 | Theobroma cacao | CDS |
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc07v2_t005240.8 ID=Tc07v2_t005240.8|Name=Tc07v2_t005240.8|organism=Theobroma cacao|type=mRNA|length=2910bp ATGGATTGGATATTGTCATTTGTTGAAGTGATAAGGAGCTTTGGGGGTCC ATACATAAATCATCATTGGAAACTTGAAGATTATATGAATGAGCTTCGAG GAAATGTGAATAGTCTAAATTCTCGAAAGCGAGACCTCGAATTAAAAATG GAAGCAGAGGATCGTTGCGGGAAAAAGATGAAGAAAGAAGTGGAGAACTG GCTCAAAGATGTAGAAAAGGTCGGCAATGAAGTCAAAAACATTGAAGAGG AGTTCCCTTCTGTTTCATTCTTGTCACGTGGCCGTCTAGGAAGTTTTGTT TGCCAAACTATTGAAAACGTAAACAAAATTTACCAACAAGGTAGTTTCCT TGACGGTGTGGCAGTTGATGGGCCTCCAGCCACCGGGGTGACATTACTAA CATCAAATCTAGAAGGTGAAATCAATGTAAAAGAACAAATTTGGAAGTAT TTGATGGGTGATGAGGTTGGAATGATTGGAGTATGTGGAATGGGTGGTAT AGGGAAAACTACCATTATGAAGCATATCAATAATCAGTTGTTGAAGGATA ATCGGTTTGATCAAGTGATATGGGTCACTGTATCAAAAGAATTGAATATT TTCAAATTGCAAGAAGATATTGCAAATTCTTTGAAACAAGCTCTTCCAAC AACTGTATTGCAACGAGCAGCACAATTAAAGAATATTTTGGAGGGAAAGA GATATGTGTTGATCTTAGATGATGTTTGGAAACGATTTTCTCTATTGGAT GTGGGAGTCCCTAAACCAACGTTAGGAATGAGGAGGAAAGTTGTACTCAC TAGTAGATTGATTGAGGTCTGTAAGTCTATGGGTTGTGAGGTGGTCAAAG TGCAACCACTTTCAAAGAATGAGTCCATGAACTTATTCTTAGATCACGTG GGGCGTAGAGTTGTACAAGATCAAAATTTAAAGGACATTGTAGACAAAAT TGTTGAGAAATGTGGCGGTTTACCACTTAGTATTGTGACAATAGCCGGGA CCATGAAGGAGGTAGATGATTTTTGTGAGTGGAAGAATGCACTAATTGAA TTAGAAGAGCGTGTGGAAAGTGTGAAAGAATTGGATATCGAAGTATATGA GCCTTTGAAGTTCAGTTATGACCATTTGAGAGATCCAAAAATTCAAAATT GTTTCTTATACTGCTCTTTATATCCTGAAGATTTCATAATTAGAAAAGTG GAATTAATTGAAAATTGGATAGATGAGGGACTCCTTGATGGCTTACAGAC CAAAGAAGCAATGCATCACAGAGGTTATAGCATTTTAAATAAGCTTGAAA ATAATTGCCTATTAGAGAGGGTTGGAGATTTTATTGATGGAGTTAAGATG CATGATGTTTTGAGGGACATGGCGTTGTATATTGCAGGTCATCAGTTCAT GGGAAAAGCAGGTATGCAATTGAAAGAATTCCCAAGTGAGCAAGAATGGA CAGTGAGTGTTGAGAAAGTTTCCTTGATGCGAAATTCAATATTAGAAATT CCTTCTCACATATCACCTAGATGGCCTCATTTATCAACTTTGATATTGCA AAGTTGTGACTTAAGAAGGATTTCAGAATCCTTTTTTAAGCACATGTCTG GGTTAAAAGTTCTAGATCTTTCTCGTAATAAAATAGTGAGTCTACCCAAT TCGATCTCTAACTTGAAAACTCTCAATGCATTGATACTTGCTAAATGTCG CCAGTTAAAATATGTGCCTTCATTAGCAAAGCTCAGAGCATTGAGAAAGT TGAACCTTTTGCACACAGGATTTGAAGAGGTTCCTCAAGGCATAGAGATG TTAGAAAACTTGAGAGATCTTCGTATGGCTTTAAAAGAGCTACCAGTAGG AATATTACGGAGGATTTGTCATCTCCAATGCTTAATGCTACAGGATACGT TTGTAAAGGGAGAAGAAGTAGGCCAATTGAGGAAGCTTGAGTGGGTTTCA TGTTCATTTCGCAACGTGCAAGAGTTTAAGAAATACGCAGAGTGTACACA AGGTAAATGGCCTACATCTTTCATTTTTCAAGTGGGGGGACCACCTGTGC AATGGTATATTGGCTTTGGGCGTCCCCCAAATTTCAAAAAAATTGAGAAA CAGGTTAAATTCAGAGATTCGGAGATAGAGAGGTGTGATGATAGGGTGGT CCCACATGACCTTCAAACTTTAACTATTGAGAAGTGTGATGATTTCAAAT GTTTAAACAACATTCCTTTGTTTCGTAAGGCGACTGACTTGAAGGAATGT CAAATTACGCAGTGTGAAGGGATGGAGTTTGTGGTTGACTTGTCATTATC GTCTAGCGATGCACTTCACAACATTGAGGAGTTATACCTTAAGGGATTGC GAAACTTGCGTGAAGTTGTGAGAGTAGGAGTAGGAGTAGGTGTAGCGGTT GAAATTGAATCTACCTCTCATGCTCCAACACCACCTGCCATCTTCTCTTC TCTTAAAGAATTCCATATGAGTTTTTGTTCGAGGGTGAAAAAGTTGTTTC CAGTTGAGCTGTTGCAGGGCCTCCAAAACTTAGAGGAAATTTTCGTTGAA TGTTGTGAAGAAATGGAGGAATTAATAGCATCAGAAGAAAATCACAAAGG AGAAGGAACAACATTTATTCTTCCCAAATTAAAATCATTGTGGTTGCAAG TCTTACCAAAATTGAAAAGCATTTGCAGCGGTGGAGTTATGATTCCTGCA GATTCTCTCCAAAATCTTGGTATAGTCAAATGTCCAGAAGTAAAGAGGAT CCCTTTGTCTCTTCCCCTTGTTGAAAATGGGAAATTATCTCCTCCTCCTT CTTTAGAAAGAATCATAGTAGGCCTGAGAGAATGGTGGGAATCAGTGGAA TGTGATCAGTCTAATGCTAAGGATGTCCTTTCTCCCTTTGTTCGATATTC TGAGTGGTAG back to topprotein sequence of Tc07v2_p005240.8 >Tc07v2_p005240.8 ID=Tc07v2_p005240.8|Name=Tc07v2_p005240.8|organism=Theobroma cacao|type=polypeptide|length=970bp
MDWILSFVEVIRSFGGPYINHHWKLEDYMNELRGNVNSLNSRKRDLELKM EAEDRCGKKMKKEVENWLKDVEKVGNEVKNIEEEFPSVSFLSRGRLGSFV CQTIENVNKIYQQGSFLDGVAVDGPPATGVTLLTSNLEGEINVKEQIWKY LMGDEVGMIGVCGMGGIGKTTIMKHINNQLLKDNRFDQVIWVTVSKELNI FKLQEDIANSLKQALPTTVLQRAAQLKNILEGKRYVLILDDVWKRFSLLD VGVPKPTLGMRRKVVLTSRLIEVCKSMGCEVVKVQPLSKNESMNLFLDHV GRRVVQDQNLKDIVDKIVEKCGGLPLSIVTIAGTMKEVDDFCEWKNALIE LEERVESVKELDIEVYEPLKFSYDHLRDPKIQNCFLYCSLYPEDFIIRKV ELIENWIDEGLLDGLQTKEAMHHRGYSILNKLENNCLLERVGDFIDGVKM HDVLRDMALYIAGHQFMGKAGMQLKEFPSEQEWTVSVEKVSLMRNSILEI PSHISPRWPHLSTLILQSCDLRRISESFFKHMSGLKVLDLSRNKIVSLPN SISNLKTLNALILAKCRQLKYVPSLAKLRALRKLNLLHTGFEEVPQGIEM LENLRDLRMALKELPVGILRRICHLQCLMLQDTFVKGEEVGQLRKLEWVS CSFRNVQEFKKYAECTQGKWPTSFIFQVGGPPVQWYIGFGRPPNFKKIEK QVKFRDSEIERCDDRVVPHDLQTLTIEKCDDFKCLNNIPLFRKATDLKEC QITQCEGMEFVVDLSLSSSDALHNIEELYLKGLRNLREVVRVGVGVGVAV EIESTSHAPTPPAIFSSLKEFHMSFCSRVKKLFPVELLQGLQNLEEIFVE CCEEMEELIASEENHKGEGTTFILPKLKSLWLQVLPKLKSICSGGVMIPA DSLQNLGIVKCPEVKRIPLSLPLVENGKLSPPPSLERIIVGLREWWESVE CDQSNAKDVLSPFVRYSEW* back to top
|