Tc07v2_t005240.3

Overview
NameTc07v2_t005240.3
Unique NameTc07v2_t005240.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2910
Properties
Property NameValue
NotePutative Probable disease resistance protein At4g27220
Model evidenceSupporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productprobable disease resistance protein At4g27220, transcript variant X11
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593741
GenbankXM_018124979.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g005240Tc07v2_g005240Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p005240.3Tc07v2_p005240.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto364132auto364132Theobroma cacaoexon
exon-auto364133auto364133Theobroma cacaoexon
exon-auto364134auto364134Theobroma cacaoexon
exon-auto364135auto364135Theobroma cacaoexon
exon-auto364136auto364136Theobroma cacaoexon
exon-auto364137auto364137Theobroma cacaoexon
exon-auto364138auto364138Theobroma cacaoexon
exon-auto364139auto364139Theobroma cacaoexon
exon-auto364140auto364140Theobroma cacaoexon
exon-auto364141auto364141Theobroma cacaoexon
exon-auto364142auto364142Theobroma cacaoexon
exon-auto364143auto364143Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto364144auto364144Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t005240.3 ID=Tc07v2_t005240.3|Name=Tc07v2_t005240.3|organism=Theobroma cacao|type=mRNA|length=2910bp
ATGGATTGGATATTGTCATTTGTTGAAGTGATAAGGAGCTTTGGGGGTCC
ATACATAAATCATCATTGGAAACTTGAAGATTATATGAATGAGCTTCGAG
GAAATGTGAATAGTCTAAATTCTCGAAAGCGAGACCTCGAATTAAAAATG
GAAGCAGAGGATCGTTGCGGGAAAAAGATGAAGAAAGAAGTGGAGAACTG
GCTCAAAGATGTAGAAAAGGTCGGCAATGAAGTCAAAAACATTGAAGAGG
AGTTCCCTTCTGTTTCATTCTTGTCACGTGGCCGTCTAGGAAGTTTTGTT
TGCCAAACTATTGAAAACGTAAACAAAATTTACCAACAAGGTAGTTTCCT
TGACGGTGTGGCAGTTGATGGGCCTCCAGCCACCGGGGTGACATTACTAA
CATCAAATCTAGAAGGTGAAATCAATGTAAAAGAACAAATTTGGAAGTAT
TTGATGGGTGATGAGGTTGGAATGATTGGAGTATGTGGAATGGGTGGTAT
AGGGAAAACTACCATTATGAAGCATATCAATAATCAGTTGTTGAAGGATA
ATCGGTTTGATCAAGTGATATGGGTCACTGTATCAAAAGAATTGAATATT
TTCAAATTGCAAGAAGATATTGCAAATTCTTTGAAACAAGCTCTTCCAAC
AACTGTATTGCAACGAGCAGCACAATTAAAGAATATTTTGGAGGGAAAGA
GATATGTGTTGATCTTAGATGATGTTTGGAAACGATTTTCTCTATTGGAT
GTGGGAGTCCCTAAACCAACGTTAGGAATGAGGAGGAAAGTTGTACTCAC
TAGTAGATTGATTGAGGTCTGTAAGTCTATGGGTTGTGAGGTGGTCAAAG
TGCAACCACTTTCAAAGAATGAGTCCATGAACTTATTCTTAGATCACGTG
GGGCGTAGAGTTGTACAAGATCAAAATTTAAAGGACATTGTAGACAAAAT
TGTTGAGAAATGTGGCGGTTTACCACTTAGTATTGTGACAATAGCCGGGA
CCATGAAGGAGGTAGATGATTTTTGTGAGTGGAAGAATGCACTAATTGAA
TTAGAAGAGCGTGTGGAAAGTGTGAAAGAATTGGATATCGAAGTATATGA
GCCTTTGAAGTTCAGTTATGACCATTTGAGAGATCCAAAAATTCAAAATT
GTTTCTTATACTGCTCTTTATATCCTGAAGATTTCATAATTAGAAAAGTG
GAATTAATTGAAAATTGGATAGATGAGGGACTCCTTGATGGCTTACAGAC
CAAAGAAGCAATGCATCACAGAGGTTATAGCATTTTAAATAAGCTTGAAA
ATAATTGCCTATTAGAGAGGGTTGGAGATTTTATTGATGGAGTTAAGATG
CATGATGTTTTGAGGGACATGGCGTTGTATATTGCAGGTCATCAGTTCAT
GGGAAAAGCAGGTATGCAATTGAAAGAATTCCCAAGTGAGCAAGAATGGA
CAGTGAGTGTTGAGAAAGTTTCCTTGATGCGAAATTCAATATTAGAAATT
CCTTCTCACATATCACCTAGATGGCCTCATTTATCAACTTTGATATTGCA
AAGTTGTGACTTAAGAAGGATTTCAGAATCCTTTTTTAAGCACATGTCTG
GGTTAAAAGTTCTAGATCTTTCTCGTAATAAAATAGTGAGTCTACCCAAT
TCGATCTCTAACTTGAAAACTCTCAATGCATTGATACTTGCTAAATGTCG
CCAGTTAAAATATGTGCCTTCATTAGCAAAGCTCAGAGCATTGAGAAAGT
TGAACCTTTTGCACACAGGATTTGAAGAGGTTCCTCAAGGCATAGAGATG
TTAGAAAACTTGAGAGATCTTCGTATGGCTTTAAAAGAGCTACCAGTAGG
AATATTACGGAGGATTTGTCATCTCCAATGCTTAATGCTACAGGATACGT
TTGTAAAGGGAGAAGAAGTAGGCCAATTGAGGAAGCTTGAGTGGGTTTCA
TGTTCATTTCGCAACGTGCAAGAGTTTAAGAAATACGCAGAGTGTACACA
AGGTAAATGGCCTACATCTTTCATTTTTCAAGTGGGGGGACCACCTGTGC
AATGGTATATTGGCTTTGGGCGTCCCCCAAATTTCAAAAAAATTGAGAAA
CAGGTTAAATTCAGAGATTCGGAGATAGAGAGGTGTGATGATAGGGTGGT
CCCACATGACCTTCAAACTTTAACTATTGAGAAGTGTGATGATTTCAAAT
GTTTAAACAACATTCCTTTGTTTCGTAAGGCGACTGACTTGAAGGAATGT
CAAATTACGCAGTGTGAAGGGATGGAGTTTGTGGTTGACTTGTCATTATC
GTCTAGCGATGCACTTCACAACATTGAGGAGTTATACCTTAAGGGATTGC
GAAACTTGCGTGAAGTTGTGAGAGTAGGAGTAGGAGTAGGTGTAGCGGTT
GAAATTGAATCTACCTCTCATGCTCCAACACCACCTGCCATCTTCTCTTC
TCTTAAAGAATTCCATATGAGTTTTTGTTCGAGGGTGAAAAAGTTGTTTC
CAGTTGAGCTGTTGCAGGGCCTCCAAAACTTAGAGGAAATTTTCGTTGAA
TGTTGTGAAGAAATGGAGGAATTAATAGCATCAGAAGAAAATCACAAAGG
AGAAGGAACAACATTTATTCTTCCCAAATTAAAATCATTGTGGTTGCAAG
TCTTACCAAAATTGAAAAGCATTTGCAGCGGTGGAGTTATGATTCCTGCA
GATTCTCTCCAAAATCTTGGTATAGTCAAATGTCCAGAAGTAAAGAGGAT
CCCTTTGTCTCTTCCCCTTGTTGAAAATGGGAAATTATCTCCTCCTCCTT
CTTTAGAAAGAATCATAGTAGGCCTGAGAGAATGGTGGGAATCAGTGGAA
TGTGATCAGTCTAATGCTAAGGATGTCCTTTCTCCCTTTGTTCGATATTC
TGAGTGGTAG
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protein sequence of Tc07v2_p005240.3

>Tc07v2_p005240.3 ID=Tc07v2_p005240.3|Name=Tc07v2_p005240.3|organism=Theobroma cacao|type=polypeptide|length=970bp
MDWILSFVEVIRSFGGPYINHHWKLEDYMNELRGNVNSLNSRKRDLELKM
EAEDRCGKKMKKEVENWLKDVEKVGNEVKNIEEEFPSVSFLSRGRLGSFV
CQTIENVNKIYQQGSFLDGVAVDGPPATGVTLLTSNLEGEINVKEQIWKY
LMGDEVGMIGVCGMGGIGKTTIMKHINNQLLKDNRFDQVIWVTVSKELNI
FKLQEDIANSLKQALPTTVLQRAAQLKNILEGKRYVLILDDVWKRFSLLD
VGVPKPTLGMRRKVVLTSRLIEVCKSMGCEVVKVQPLSKNESMNLFLDHV
GRRVVQDQNLKDIVDKIVEKCGGLPLSIVTIAGTMKEVDDFCEWKNALIE
LEERVESVKELDIEVYEPLKFSYDHLRDPKIQNCFLYCSLYPEDFIIRKV
ELIENWIDEGLLDGLQTKEAMHHRGYSILNKLENNCLLERVGDFIDGVKM
HDVLRDMALYIAGHQFMGKAGMQLKEFPSEQEWTVSVEKVSLMRNSILEI
PSHISPRWPHLSTLILQSCDLRRISESFFKHMSGLKVLDLSRNKIVSLPN
SISNLKTLNALILAKCRQLKYVPSLAKLRALRKLNLLHTGFEEVPQGIEM
LENLRDLRMALKELPVGILRRICHLQCLMLQDTFVKGEEVGQLRKLEWVS
CSFRNVQEFKKYAECTQGKWPTSFIFQVGGPPVQWYIGFGRPPNFKKIEK
QVKFRDSEIERCDDRVVPHDLQTLTIEKCDDFKCLNNIPLFRKATDLKEC
QITQCEGMEFVVDLSLSSSDALHNIEELYLKGLRNLREVVRVGVGVGVAV
EIESTSHAPTPPAIFSSLKEFHMSFCSRVKKLFPVELLQGLQNLEEIFVE
CCEEMEELIASEENHKGEGTTFILPKLKSLWLQVLPKLKSICSGGVMIPA
DSLQNLGIVKCPEVKRIPLSLPLVENGKLSPPPSLERIIVGLREWWESVE
CDQSNAKDVLSPFVRYSEW*
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