Tc07v2_t005170.3

Overview
NameTc07v2_t005170.3
Unique NameTc07v2_t005170.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1449
Properties
Property NameValue
NotePutative beta-glucosidase 41
Model evidenceSupporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Productputative beta-glucosidase 41, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593729
GenbankXM_018124055.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g005170Tc07v2_g005170Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p005170.3Tc07v2_p005170.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto364037auto364037Theobroma cacaoexon
exon-auto364038auto364038Theobroma cacaoexon
exon-auto364039auto364039Theobroma cacaoexon
exon-auto364040auto364040Theobroma cacaoexon
exon-auto364041auto364041Theobroma cacaoexon
exon-auto364042auto364042Theobroma cacaoexon
exon-auto364043auto364043Theobroma cacaoexon
exon-auto364044auto364044Theobroma cacaoexon
exon-auto364045auto364045Theobroma cacaoexon
exon-auto364046auto364046Theobroma cacaoexon
exon-auto364047auto364047Theobroma cacaoexon
exon-auto364048auto364048Theobroma cacaoexon
exon-auto364049auto364049Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto364050auto364050Theobroma cacaoCDS
CDS-auto364051auto364051Theobroma cacaoCDS
CDS-auto364052auto364052Theobroma cacaoCDS
CDS-auto364053auto364053Theobroma cacaoCDS
CDS-auto364054auto364054Theobroma cacaoCDS
CDS-auto364055auto364055Theobroma cacaoCDS
CDS-auto364056auto364056Theobroma cacaoCDS
CDS-auto364057auto364057Theobroma cacaoCDS
CDS-auto364058auto364058Theobroma cacaoCDS
CDS-auto364059auto364059Theobroma cacaoCDS
CDS-auto364060auto364060Theobroma cacaoCDS
CDS-auto364061auto364061Theobroma cacaoCDS
CDS-auto364062auto364062Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t005170.3 ID=Tc07v2_t005170.3|Name=Tc07v2_t005170.3|organism=Theobroma cacao|type=mRNA|length=1449bp
ATGGTTTCACCTTTGGAACAGCTTCTTCTGCTTACCAGTTTGAAGGAGCT
GTCAATGAAGGGAACAAGGGAGATAGCATATGGGATACCTTCACTAGAAA
ACCAGGGAAGATTATGGACTTCAGCAATGCAGACACGGCTGTTGATCAGT
ATCATCGGTTTGAGACTTGATGAAGGATTTGGGAATGGATGCTTACAGAT
TTTCAATATCTTGGTCAAGAATATTTCCGAAATATTACTGTCAATAGATG
GAGCAGGGGAATCTAATGTGGAAGGAATAAACTACTACAACAGACTCATT
GATGCTTTGATACAGAAAGGAATCCAGCCTTATGTAACTCTATATCATTG
GGATCTTCCACAGATGCTTGAGGATAAATATGAAGGATGGTTGAGTAGAC
AGATAGTAGATGACTTTGAGCATTTCGCCTTTACTTGCTTCCAAGCTTTT
GGAGACAGAGTAAAACACTGGATCACCTTCAACGAACCTCACGGTTTCTC
AATCCAGGGTTATGACTCAGGCATTCAAGCTCCTGGAAGGTGCTCAATTC
TTGGGGGTCTACTTTGTAAGACAGGAAACTCATCCACTGAACCATATATT
GTAGCTCACAACATCCTACTGTCTCATGCTGCTGCTTATCACAGTTACCG
GAAAAATTTCAAGGAAAGACAGGGAGGACAAATTGGAATGGCACTGGATG
CCAAATGGTATGAACCAATCTCTGAAAGCGACGAGGATAAAGATGCAGCA
AATAGAGCAATGGATTTTGGGATTGGATGGTTCCTTGATCCACTTTTCTT
TGGTGACTATCCTCTTTCAATGAAAAGGCTTGTTGGAGAGAGGTTACCTC
AAGTTTTACCAGAGATGTCCAAAATGCTACTGGGGTCTCTGGACTTCATT
GGCATAAACCATTATACCACATTATATGCCAGGAATGACAGAACTCGCAT
CAGGAAACTAATCTTGCAGGATGCTTCATCTGATGCTGCTGTCATTACTA
CCTCTTTTCGAGGTGGAGCTCCAATCGGAGAAAGAGCAGCTTCACGCTGG
CTACGTGTTGTCCCATGGGGCATCAGGAAGTTGGCTAGATATGTGAAAGA
TAAATATGGGAATCCACCTGTTATAATAACAGAAAATGGCATGGATGATC
TAAATAGCCCATTCATAAACATGAAAAAGGCCTTGCAAGATGACAAGAGG
ATAAAATTCCACAGGGATTATCTGTCAAACCTATCAGCTGCTATAAGGGA
AGACAACTGTGATGTGCGGGGTTATTTTGTGTGGTCTTTGCTGGATAACT
GGGAATGGAACTCTGGCTACACCGTCCGGTTTGGACTCTACTTTGTGGAC
TACAAAAACAATCTTACAAGGGTTCCAAAGGCTTCTGTTGAATGGTTTAA
AGGTGTACTCAGACCAAGTCATTTGAGCAATTTGAGGAACCAGATTTAA
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protein sequence of Tc07v2_p005170.3

>Tc07v2_p005170.3 ID=Tc07v2_p005170.3|Name=Tc07v2_p005170.3|organism=Theobroma cacao|type=polypeptide|length=483bp
MVSPLEQLLLLTSLKELSMKGTREIAYGIPSLENQGRLWTSAMQTRLLIS
IIGLRLDEGFGNGCLQIFNILVKNISEILLSIDGAGESNVEGINYYNRLI
DALIQKGIQPYVTLYHWDLPQMLEDKYEGWLSRQIVDDFEHFAFTCFQAF
GDRVKHWITFNEPHGFSIQGYDSGIQAPGRCSILGGLLCKTGNSSTEPYI
VAHNILLSHAAAYHSYRKNFKERQGGQIGMALDAKWYEPISESDEDKDAA
NRAMDFGIGWFLDPLFFGDYPLSMKRLVGERLPQVLPEMSKMLLGSLDFI
GINHYTTLYARNDRTRIRKLILQDASSDAAVITTSFRGGAPIGERAASRW
LRVVPWGIRKLARYVKDKYGNPPVIITENGMDDLNSPFINMKKALQDDKR
IKFHRDYLSNLSAAIREDNCDVRGYFVWSLLDNWEWNSGYTVRFGLYFVD
YKNNLTRVPKASVEWFKGVLRPSHLSNLRNQI*
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