Tc07v2_t005060.3

Overview
NameTc07v2_t005060.3
Unique NameTc07v2_t005060.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2931
Properties
Property NameValue
NotePutative Probable disease resistance protein At4g27220
Model evidenceSupporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productprobable disease resistance protein At4g27220, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593740
GenbankXM_018124451.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g005060Tc07v2_g005060Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p005060.3Tc07v2_p005060.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto363799auto363799Theobroma cacaoexon
exon-auto363800auto363800Theobroma cacaoexon
exon-auto363801auto363801Theobroma cacaoexon
exon-auto363802auto363802Theobroma cacaoexon
exon-auto363803auto363803Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto363804auto363804Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t005060.3 ID=Tc07v2_t005060.3|Name=Tc07v2_t005060.3|organism=Theobroma cacao|type=mRNA|length=2931bp
ATGGAGTTCATAGGGTCAATTCTTGAAGTGGTAAAGTGCTTTGGGGGTCC
AACATGTACATACATAGACTATCATCGAAAACTTGAAGAACAGATGAATC
ATCTTCGAGAAAAAGTGAATGTTTTAAATATTCGAAAGGGAGACCTCGTA
TTAAGAAAGGATGAGGAGCTTCGTCACAGAAGAGTGGTGAGGGAAGAAGT
GGAGTACTGGTTTAAAGCTGTAGAAAAGGTAAACACTGAAATGCAAGAGA
TTGAAATGAAGTTTCGTGCTGTTTCATACTTCTTACGTGGTCGTTTTGGA
AAATTTGTTTGTCGAAAGATTGAAGAAGTGAAGGAAATTCACCAACAAGG
TAGTTTCCCTGACGGTGTGGCTGTTGATGGGCCTCCAGCCACCGGGGTGA
TGTTACCAACACCAAACCTAGAAGGTGAGATCGATGTAAAAGAGCAAATT
TGGGAGTATTTGATGGATGATGAGGTTGGAATGATTGGAGTATGTGGAAT
GGGTGGCATAGGGAAAACTACCATCATGAAGCATATCAATAATCAATTGT
TGGAGGAAAGTGATCGATTTGATAAAGTGATATGGGTCACCGTATCAAAA
GAAATGAATATTTCCAAATTACGAAGAGATATTGCACATTCTTTGAAACT
ATCTAATCAACTTTCAGAAGATGAATTGAAAGCAGTGTTAAAAGATACTT
TGGAGGGAAAGAGTTATGTGTTAATCTTAGATGATGTTTGGAAACAGTTT
CCTCTATTGGATGTGGGAATCTTTGAATCAACATTAGGCATGGGAAAGAA
AGTAGTGTTCACTAGCAGGTCCAGTGAGGTCTGTAAATCTATGGGTTGCA
AGGTGGTGGTCAATGTGCAACCACTTTCAAAATTGGAGTCCATGAACTTA
TTCTTATATCATGTGGGGCAAAGCGTTGTACAAGATCAAAATTTAAAAGA
CATTGTCAACAAAATTGTTGAGCAATGTGGTGGTTTACCACTTAGTATTG
TGACAATAGCCGGAAGCATGAAAGGGGTAGAAGATATTTGTGAGTGGAAG
AATGTACTAATTGAATTAGAAGAGAGGGTGGAAAGTGTGAAAGAATTGGA
TATCAAAGTATATGAGCCTTTGAAGTTCAGTTATGACCATTTGAGAGATC
CAAAAATCCAAAATTGTTTCTTATATTGCTCCCTATATCCTGAAGATTAT
ATAATTAGAAAAGTGGAATTAATTGAAAATTGGATAGATGAGGGACTCCT
TGATGGCTTACAGACCAAAGAAGCAATGCATCATAGAGGTTATAGCATTT
TAAATAAGCTTGAAAGTAATTGCCTATTAGAGAGGGCTACATTTCTTATT
GATGATGATGGAGTTAAGATGCATGATGTTTTGAGGGACATGGCGTTGTA
TATTGCAGGTCATCAGTTCATGGGAAAAGTAGGTATGCAATTGAAAGAAT
TCCCAAGTGAGCAAGAATGGACAGTGAGTGTTGAGAAAGTTTCCTTGATG
CGAAATTCAATATTAGAAATTCCTTCTCACATATCACCTAGATGGCCTCA
TTTATCAACTTTGATATTGCAACAATGTGGCTTACAAAAGATTTCAGAAT
CTTTTTTTAAGCACATGCCTGGGTTAAAAGTTCTAAATCTTTCATATAAT
TATTCCTTAAAGTATCTGCCTAATTCGATCTCAAACTTGAAAACTCTCAA
TGCATTGGTACTCTTTTGTTGTGATAAGTTAAAATATGTGCCTTCCTTAG
TAGAGCTCACAGCACTAAGAAAGTTGAACCTTTTGCGCACAGCAATTAAA
GAGGTTCCTCATGGCATAGAGATGTTAGAAAACTTGAGAGATCTTCGTAT
GATGTCATGGGCTTTAAAAGAGCTACCAGTAGGAATATTACGGAGGATTT
GTCATCTCCAATGCTTAATGCTAGCGGATACGTTTGTAAAGGGAGAAGAA
GTAGGCCAATTGAGGAAGCTCGAGTGGGTTTCATGTTCATTTCGCAACGT
GCAAGAGTTTAATAAATACGCAGAGTGTACGCAAGGTAAATGGCCTACAT
CTTTCACTTTTCAAGTGGGGGGATCACCTATGCGATGGTATATTGGTTTT
GGGCAATCCCCAAATTTCAAAAAAATTGAGAAATGGGTTATATTCGCAGA
TTCGGAGATAGAGAGGTGTGATGATAGGGTGGTCCCACATGACCTTCAAA
CTTTAACTATTGAGAAGTACGATGATTTCAAATGTTTAAACAACATTCCT
TTGTTTCGTAAGGCGACTGACTGGAAGGAATGTCAAATTGGGGAGTGTGA
AGGGATGGAGTGTGTGGTTGACTTGTCATTATCGTCTTGTGACGCACTTG
ACAACATTGAGGAGTTACACCTATTTTTGTTGCCAAACTTGCGTGAAGTT
GTGAGAGTAGGAGTAGCGGTTGAAATTGAATCTACCTCTCATGCTCCAAC
ACCACCTGCCATCTTCTCTTCTCTTAAAAAATTCCATATGAGAAGTTGTT
CGAGGGTGAAGAAGTTGTTTCCAGTTGAGCTGTTGAAGGGCCTCCAAAAC
TTAGAGACAATTCAAGTTGAAGTTTGTGAAGAAATGGAGGAAATAATAGC
ATCAGAAGAAAATCACAAAGGAGAAGGAACAACATTTATTCTTCCCAAAT
TAAAATCATTAAAGTTACAGTTGTTACCAAAATTGAAAAGCATTTGCAGC
GGGAGAGTTATGATTCCTGCAGATTCTCTCCAATATCTTTATATAATCAA
ATGTCCAGAAGTAAAGAGGATCCCTTTGTCTCTTCCCCTTGTTGAAAATG
GGAAACCATCTCCTCCTTCTTCTCTACAAAAAATCACAGCATGGCCGAGA
GAATGGTGGGAATCAGTGGAATGGGATCAGCCTGATGCTAAGGATGTCCT
TTCTCCCTTTCTTCAATATTCTGGCTTATAG
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protein sequence of Tc07v2_p005060.3

>Tc07v2_p005060.3 ID=Tc07v2_p005060.3|Name=Tc07v2_p005060.3|organism=Theobroma cacao|type=polypeptide|length=977bp
MEFIGSILEVVKCFGGPTCTYIDYHRKLEEQMNHLREKVNVLNIRKGDLV
LRKDEELRHRRVVREEVEYWFKAVEKVNTEMQEIEMKFRAVSYFLRGRFG
KFVCRKIEEVKEIHQQGSFPDGVAVDGPPATGVMLPTPNLEGEIDVKEQI
WEYLMDDEVGMIGVCGMGGIGKTTIMKHINNQLLEESDRFDKVIWVTVSK
EMNISKLRRDIAHSLKLSNQLSEDELKAVLKDTLEGKSYVLILDDVWKQF
PLLDVGIFESTLGMGKKVVFTSRSSEVCKSMGCKVVVNVQPLSKLESMNL
FLYHVGQSVVQDQNLKDIVNKIVEQCGGLPLSIVTIAGSMKGVEDICEWK
NVLIELEERVESVKELDIKVYEPLKFSYDHLRDPKIQNCFLYCSLYPEDY
IIRKVELIENWIDEGLLDGLQTKEAMHHRGYSILNKLESNCLLERATFLI
DDDGVKMHDVLRDMALYIAGHQFMGKVGMQLKEFPSEQEWTVSVEKVSLM
RNSILEIPSHISPRWPHLSTLILQQCGLQKISESFFKHMPGLKVLNLSYN
YSLKYLPNSISNLKTLNALVLFCCDKLKYVPSLVELTALRKLNLLRTAIK
EVPHGIEMLENLRDLRMMSWALKELPVGILRRICHLQCLMLADTFVKGEE
VGQLRKLEWVSCSFRNVQEFNKYAECTQGKWPTSFTFQVGGSPMRWYIGF
GQSPNFKKIEKWVIFADSEIERCDDRVVPHDLQTLTIEKYDDFKCLNNIP
LFRKATDWKECQIGECEGMECVVDLSLSSCDALDNIEELHLFLLPNLREV
VRVGVAVEIESTSHAPTPPAIFSSLKKFHMRSCSRVKKLFPVELLKGLQN
LETIQVEVCEEMEEIIASEENHKGEGTTFILPKLKSLKLQLLPKLKSICS
GRVMIPADSLQYLYIIKCPEVKRIPLSLPLVENGKPSPPSSLQKITAWPR
EWWESVEWDQPDAKDVLSPFLQYSGL*
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