|
|
Properties
| Property Name | Value |
|---|
| Note | DNA polymerase I B, chloroplastic/mitochondrial |
| Model evidence | Supporting evidence includes similarity to: 3 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns |
| Product | DNA polymerase I B, chloroplastic/mitochondrial |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc07v2_t003860.1 ID=Tc07v2_t003860.1|Name=Tc07v2_t003860.1|organism=Theobroma cacao|type=mRNA|length=3480bp
ATGGCTGCTATGGGGGTTGTTTCTACTTCCCAAACTGCTGCTACTACTAC
CCCTTTGGGTAGACCGTTTTGCCCTTCTTCTTCTTGGTTTTCCCGGTCTT
GTCCTTGGCCTTCTTCTTCTCCTTCGTCATCTAAGCACTTCTTTTTGGCT
TCTAGAGCCTTGCACAGGCGAGAAATGTGCACAATGCAGAGTGTTCAATG
TGCTTTTCTTAATGCAACCATGTCAAGTAGTTCCAGCTGTTGCTATCATC
CCAAAGGTATGAGACTTAAGGTAGCTGCTTCTAAATATGCTAGGATGGTC
CACCCTGACCCGGATCAGTATTTTTCTGCTAAGAAGTGCAAAGGAGTGAG
TGTGGACCAGAGAAACAATGAAAGCCCAGCAAGTTTTCAAAAGTCTAGGG
TGACATCATTTCGAGCTAATGCTTTTACCTTTACTTCAAAAAAAACTAGC
ATACCCAGCACTGAGCGTTCATGGGAGAAAGAAGCTCGCAGGATAAAGGA
ATATAAGGAGATGTCAAAAGAGAGCTTTAAAGGTAGTAGTTCTTATTCCA
GTGACCAACACAACTTGAATCTGAAGCTTACTGGCTCATTATTTAAAACA
AATAATAAAGAAGAATTAGTTTCTAGAAATAGTGGAAAAAATAAATCTCT
TTCTGAGGGTTGTTGTCCACCCCAGCCAACCAGTACTAAACAAATGTCCA
GATTCAACAATATAGCTACTGGTGGAATAAATGGTTCCAAGCAGCTAAAA
GGTTCAAGTTCGACTGAAGTTTTAAATAATGGATCGTTGCCAGGGCTGGT
CTTGGATGACAATAAAGAGATTGGAAACAGTGGAGATAGTAATTTTCTGT
CTGAGAGCCATTGTCCAGACCATCCAACTAACAATAAACAAATTTCTAGA
GCCAAAAATATATCTGCCAATAGAATAAATGGTTCCAAGCAGTTAAAAGG
TTCAACTAAAACAGAAGTTTCAAGTAATGGCTCGTTGAAAGGGACGGTTT
CAGATGCCAACCAAGACACAGGACATATGAATCCTAATGAAACCAGAAGG
GACCATGCCAATGAAAATGGGGTTGCCAGCACTGAAGAAGCTAAAGTAGT
TTCTCAAGAAGATATCAGCAAGCGGCTTGCTAGGATTTATGACCAGGTTC
TTGTTGTAGATAATATCTCTGTTGCAGGGGAAGTTGTTAAGATGCTTACA
ACTCAATACAGTCATCTTGTTCATGCATGTGATACTGAGGTGTCTAAGAT
TGATGTGAAGCAAGAGACTCCTGTTGATCATGGTGAGATAACATGTTTCA
GTATTTGTTCTGGAGAAAATGCAGATTTTGGAAATGGGAAGACCTGTATC
TGGGTAGATGTTCTGGATGGTGGTGGCAGGGCTCTTCTAAAGGAATTTGA
GCTGTTTTTCAAAGATCAATCTATCAAAAAGGTGTGGCACAATTATAGCT
TTGATAATCATGTCATTAGGAACTATGGGCTGGAGGTTTCTGGATTTCAT
GCTGACACAATGCATATGGCACGGTTGTGGGACTCATCAAGACGAACAGC
AGGTGGTTATTCGCTTGAAGCGCTTACAGGTGATAAAAATGTTATGAACA
GGACTAAATGGCGCAAAGAAGAAAATGAATTAATTGGTAAAATATCAATG
AAAACCATTTTTGGCAAGAAAAAATTGAAAAAAGATGGATCTGAGGGAAA
AATGATCACCATTGCTCCTGTTGAAGAGCTACAACGGGAAGAACGCAAAT
TATGGATTTCTTATTCTGCCTTAGATGCAATAAGCACACTGAGACTTTAT
GAGAGCTTGAAAAGCAAACTATCAAGCATGTCTTGGGTATTTGATGGTAA
ACCAGTTTCTGGGAAGTCCATGTACCACTTCTACGAAGAGTACTGGCAAC
CATTTGGTGAGCTTCTTGTTAACCTGGAACGTGAGGGTATGTTGGTTGAT
CGGATTTATCTTGCTCAGTTAGAGAAGGTGGCTAAAGCAGAGCAAGAAAT
TGCTGCTAATAGGTTTCGCACCTGGGCATCTAGATATTGTGATGATGCCA
AATATATGAATGTGGGAAGTGATACTCAGCTCCGCCAGCTTCTTTATGGT
GGCATTGTTAACAGTAAGGATCCAAATGAGAGTCTACCTGTTCAGAAAAC
TTTCAAAGTTCCCAATGTTGATAAAGTGATTGAAGAAGGCAAAAAGGTTC
CCACTAAGTTTCGCAGTATTAAGCTGCATAGCCTTGGTGTTGAGCTCCCT
GCTGAGGTGTACACTGCCACTGGTTGGCCCTCAGTTAGTGGTAATGCTTT
GAAGACCTTAGCTGGGAAGGTTTCTGCAGAATATGATTTCACAGATGATA
CTAATGATGGTGATATCAACAATTGTCCTGAAATGGTGACTGATGTTGAT
ACATCTGCGTATGGAACCGCTTTTGCAGCATTTGGGGATGAGGAAAAAGG
AAGGGAGGCATGCCATGCAATTGCTTCATTGTGTGAAGTTTGCTCTATTG
ACTCTCTAATATCCAATTTCATTCTCCCCTTGCAGGGGAGTAATGTATCA
GGCAAGAGTGGGCATGTTCATTGTTCTTTGAATATCAATACGGAAACTGG
GCGCTTATCTGCCAGGAGACCAAATTTGCAGAATCAACCTGCACTAGAGA
AGGACCGCTATAAGATACGTCAGGCCTTTGTAGCTGCCCCTGGAAATTCC
CTCATTGTTGCAGATTATGGGCAGTTGGAACTTAGGATTCTTGCCCATTT
GGCTGACTGTAAAAGCATGTTGGATGCCTTCAAAGCTGGTGGAGATTTCC
ATTCAAGGACTGCAATGAACATGTACTCTCATATCCGTGAAGCTGTTGAA
AAGAGGCAAGTTCTTCTTGAGTGGCATCCTCAACCCGGTGAAGAGAAGCC
ACCAGTTCCACTTTTAAAGGATGCCTTTACTTCTGAAAGAAGAAAAGCTA
AAATGCTCAACTTTTCCATTGCTTATGGAAAAACTCCTGTGGGGCTTGCT
AAGGATTGGAAGGTTTCTGTAGAAGAAGCAAAGAACACAGTTGATCTCTG
GTATAAAGAAAGACAAGAAGTGCTCGAGTGGCAGAAACAGCGTAAATATG
AAGCTCAGAAACTCAGGCGTGTTAAAACATTGCTTGGAAGGGCTCGCCTC
TTCCCATCATATGCTCATGCTACACGTGCTCAAAAAGGTCATATTGAACG
GGCTGCTATCAATACTCCAGTCCAGGGCAGTGCTGCTGATGTTGCAATGT
GCGCCATGTTACAAATATCAAAGAATGAACGTCTAAAGGAGCTTGGGTGG
AGGCTTCTTTTACAGGTTCATGATGAAGTAATCTTGGAAGGACCAAGTGA
GTCAGCTGAGACTGCAAAGGCAATTGTTGTTGAGTGCATGTCAAAACCCT
TTGAAGAAGGAAAGAACATTCTTAAAGTTGACCTAGCTGTTGATGCCAAG
TGTGCTCAAAATTGGTATGCTGCCAAATAG back to topprotein sequence of Tc07v2_p003860.1 >Tc07v2_p003860.1 ID=Tc07v2_p003860.1|Name=Tc07v2_p003860.1|organism=Theobroma cacao|type=polypeptide|length=1160bp
MAAMGVVSTSQTAATTTPLGRPFCPSSSWFSRSCPWPSSSPSSSKHFFLA
SRALHRREMCTMQSVQCAFLNATMSSSSSCCYHPKGMRLKVAASKYARMV
HPDPDQYFSAKKCKGVSVDQRNNESPASFQKSRVTSFRANAFTFTSKKTS
IPSTERSWEKEARRIKEYKEMSKESFKGSSSYSSDQHNLNLKLTGSLFKT
NNKEELVSRNSGKNKSLSEGCCPPQPTSTKQMSRFNNIATGGINGSKQLK
GSSSTEVLNNGSLPGLVLDDNKEIGNSGDSNFLSESHCPDHPTNNKQISR
AKNISANRINGSKQLKGSTKTEVSSNGSLKGTVSDANQDTGHMNPNETRR
DHANENGVASTEEAKVVSQEDISKRLARIYDQVLVVDNISVAGEVVKMLT
TQYSHLVHACDTEVSKIDVKQETPVDHGEITCFSICSGENADFGNGKTCI
WVDVLDGGGRALLKEFELFFKDQSIKKVWHNYSFDNHVIRNYGLEVSGFH
ADTMHMARLWDSSRRTAGGYSLEALTGDKNVMNRTKWRKEENELIGKISM
KTIFGKKKLKKDGSEGKMITIAPVEELQREERKLWISYSALDAISTLRLY
ESLKSKLSSMSWVFDGKPVSGKSMYHFYEEYWQPFGELLVNLEREGMLVD
RIYLAQLEKVAKAEQEIAANRFRTWASRYCDDAKYMNVGSDTQLRQLLYG
GIVNSKDPNESLPVQKTFKVPNVDKVIEEGKKVPTKFRSIKLHSLGVELP
AEVYTATGWPSVSGNALKTLAGKVSAEYDFTDDTNDGDINNCPEMVTDVD
TSAYGTAFAAFGDEEKGREACHAIASLCEVCSIDSLISNFILPLQGSNVS
GKSGHVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFVAAPGNS
LIVADYGQLELRILAHLADCKSMLDAFKAGGDFHSRTAMNMYSHIREAVE
KRQVLLEWHPQPGEEKPPVPLLKDAFTSERRKAKMLNFSIAYGKTPVGLA
KDWKVSVEEAKNTVDLWYKERQEVLEWQKQRKYEAQKLRRVKTLLGRARL
FPSYAHATRAQKGHIERAAINTPVQGSAADVAMCAMLQISKNERLKELGW
RLLLQVHDEVILEGPSESAETAKAIVVECMSKPFEEGKNILKVDLAVDAK
CAQNWYAAK* back to top
|