Tc07v2_t003580.2

Overview
NameTc07v2_t003580.2
Unique NameTc07v2_t003580.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length723
Properties
Property NameValue
NotePutative disease resistance protein At5g05400
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productputative disease resistance protein At5g05400, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID108662972
GenbankXM_018125141.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g003580Tc07v2_g003580Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p003580.2Tc07v2_p003580.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto361275auto361275Theobroma cacaoexon
exon-auto361276auto361276Theobroma cacaoexon
exon-auto361277auto361277Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto361278auto361278Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t003580.2 ID=Tc07v2_t003580.2|Name=Tc07v2_t003580.2|organism=Theobroma cacao|type=mRNA|length=723bp
ATGGCTGAACCTGTTACCGCTGTTGCAACCAATACCCTGGGGAACCTGGC
AACAGAATACGCATCACCTTATCTCAGTTATTTTTTCCATTTCGGCAAAA
TTGTTGAAGATTTCAAGAATCGACGAAATCAACTTGAATTGAGAAAAGTT
CGAGTGAAAAATGATGTCGCTGAGGCAAAAAAGCAAACTCTGGTAATTGA
GAAGGCCGTTGAGGAGTGGCTAACAAGGGCAGACAAAGAATTGGGAGAAG
CTCAGAGTTTGGAAGATGAAATTGAACGTAACAAGTGTTTCAATTGGCGT
CCTAGTTGGGGCTGGCGATACTGCTTAAGTATCAAAGTAGCTAAGAAGAC
ACTTCGTATCTCTCAACTTTTAGAGAATTCTAATTTTGAACGAGTAGGTT
ACCGAGCTACTCTCCCAGGATTAGAGTTCATTCCATCTAAGGATTTCATG
TCTTCTGAATCTTCGAATTCTGCTTTCAAAGAGATCATGGAGGCTCTGAA
TAATGGTGATGTGAACATGATTGGACTACATGGGATGGGAGGAGTGGGTA
AAACCACTTTGGCAAAAGAAGTGGGAAACCAAGCCAAACAACTCTTCGAT
AAAGTTGTGCCTGTAACTCTGTCCCAAAAGCCAAACATCAACAATATTCA
AGATAAAATTGCAGACTTCCTAGATTTAGATTTTCAAAAGAAGACACCAG
AAGGAAGAGCAGAACAATTGTAG
back to top

protein sequence of Tc07v2_p003580.2

>Tc07v2_p003580.2 ID=Tc07v2_p003580.2|Name=Tc07v2_p003580.2|organism=Theobroma cacao|type=polypeptide|length=241bp
MAEPVTAVATNTLGNLATEYASPYLSYFFHFGKIVEDFKNRRNQLELRKV
RVKNDVAEAKKQTLVIEKAVEEWLTRADKELGEAQSLEDEIERNKCFNWR
PSWGWRYCLSIKVAKKTLRISQLLENSNFERVGYRATLPGLEFIPSKDFM
SSESSNSAFKEIMEALNNGDVNMIGLHGMGGVGKTTLAKEVGNQAKQLFD
KVVPVTLSQKPNINNIQDKIADFLDLDFQKKTPEGRAEQL*
back to top