Tc07v2_t003580.1

Overview
NameTc07v2_t003580.1
Unique NameTc07v2_t003580.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length723
Properties
Property NameValue
NotePutative disease resistance protein At5g05400
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Productputative disease resistance protein At5g05400, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID108662972
GenbankXM_018125139.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g003580Tc07v2_g003580Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p003580.1Tc07v2_p003580.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto361269auto361269Theobroma cacaoexon
exon-auto361270auto361270Theobroma cacaoexon
exon-auto361271auto361271Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto361272auto361272Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t003580.1 ID=Tc07v2_t003580.1|Name=Tc07v2_t003580.1|organism=Theobroma cacao|type=mRNA|length=723bp
ATGGCTGAACCTGTTACCGCTGTTGCAACCAATACCCTGGGGAACCTGGC
AACAGAATACGCATCACCTTATCTCAGTTATTTTTTCCATTTCGGCAAAA
TTGTTGAAGATTTCAAGAATCGACGAAATCAACTTGAATTGAGAAAAGTT
CGAGTGAAAAATGATGTCGCTGAGGCAAAAAAGCAAACTCTGGTAATTGA
GAAGGCCGTTGAGGAGTGGCTAACAAGGGCAGACAAAGAATTGGGAGAAG
CTCAGAGTTTGGAAGATGAAATTGAACGTAACAAGTGTTTCAATTGGCGT
CCTAGTTGGGGCTGGCGATACTGCTTAAGTATCAAAGTAGCTAAGAAGAC
ACTTCGTATCTCTCAACTTTTAGAGAATTCTAATTTTGAACGAGTAGGTT
ACCGAGCTACTCTCCCAGGATTAGAGTTCATTCCATCTAAGGATTTCATG
TCTTCTGAATCTTCGAATTCTGCTTTCAAAGAGATCATGGAGGCTCTGAA
TAATGGTGATGTGAACATGATTGGACTACATGGGATGGGAGGAGTGGGTA
AAACCACTTTGGCAAAAGAAGTGGGAAACCAAGCCAAACAACTCTTCGAT
AAAGTTGTGCCTGTAACTCTGTCCCAAAAGCCAAACATCAACAATATTCA
AGATAAAATTGCAGACTTCCTAGATTTAGATTTTCAAAAGAAGACACCAG
AAGGAAGAGCAGAACAATTGTAG
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protein sequence of Tc07v2_p003580.1

>Tc07v2_p003580.1 ID=Tc07v2_p003580.1|Name=Tc07v2_p003580.1|organism=Theobroma cacao|type=polypeptide|length=241bp
MAEPVTAVATNTLGNLATEYASPYLSYFFHFGKIVEDFKNRRNQLELRKV
RVKNDVAEAKKQTLVIEKAVEEWLTRADKELGEAQSLEDEIERNKCFNWR
PSWGWRYCLSIKVAKKTLRISQLLENSNFERVGYRATLPGLEFIPSKDFM
SSESSNSAFKEIMEALNNGDVNMIGLHGMGGVGKTTLAKEVGNQAKQLFD
KVVPVTLSQKPNINNIQDKIADFLDLDFQKKTPEGRAEQL*
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