Tc07v2_t003120.1

Overview
NameTc07v2_t003120.1
Unique NameTc07v2_t003120.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1611
Properties
Property NameValue
NoteCalcium-dependent protein kinase 9
Model evidenceSupporting evidence includes similarity to: 8 ESTs, 157 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productcalcium-dependent protein kinase 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593501
GenbankXM_007020758.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g003120Tc07v2_g003120Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p003120.1Tc07v2_p003120.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto360564auto360564Theobroma cacaoexon
exon-auto360565auto360565Theobroma cacaoexon
exon-auto360566auto360566Theobroma cacaoexon
exon-auto360567auto360567Theobroma cacaoexon
exon-auto360568auto360568Theobroma cacaoexon
exon-auto360569auto360569Theobroma cacaoexon
exon-auto360570auto360570Theobroma cacaoexon
exon-auto360571auto360571Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto360572auto360572Theobroma cacaoCDS
CDS-auto360573auto360573Theobroma cacaoCDS
CDS-auto360574auto360574Theobroma cacaoCDS
CDS-auto360575auto360575Theobroma cacaoCDS
CDS-auto360576auto360576Theobroma cacaoCDS
CDS-auto360577auto360577Theobroma cacaoCDS
CDS-auto360578auto360578Theobroma cacaoCDS
CDS-auto360579auto360579Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t003120.1 ID=Tc07v2_t003120.1|Name=Tc07v2_t003120.1|organism=Theobroma cacao|type=mRNA|length=1611bp
ATGGGTGGTTGTCTGACAAAAAGCAAAGAACCAAAGCCAAAGCATAATGG
CTACAGATCAGGAGCAACAACTACAGTTGCTGTGCATCAACAAAGATACC
AAGAACCTGTGAGGCCCGCACCTGTTCAACCCCAATTCCACCACATCCCT
GAAAAGCCAGGTGCTCAAACACCTTGGAAGCCGGTTGCTCCAGCACCAAG
CCCCAAGCCTGCCCCCAGGGTTGATACAATTCTTGGTAAACCATATGAAG
ATATAAGGATGCGCTATACAATTGGTAAGGAATTGGGAAAAGGTCAGTTT
GGTGTAACTTATCTTTGCACTGAGAATTCAACTGGAAAGCAATATGCTTG
CAAGACAATTTCTAAGAGGAAGCTAGTTACAAAGAATGATAAGGACGATA
TGAAAAGGGAGATACAGATTATGCAACACTTGAGTGGACAGCCTAATATT
GTGGAGTTTAAAGGTGCTTATGAGGATAAGCAATCTGTTCACCTTGTAAT
GGAATTGTGTGCTGGTGGTGAGTTGTTTGATAGGATTATAGCTAAGGGAC
ATTATAGTGAAAGGGCAGCTGCATCTATCTGCAGGGCGATTGTTAATGTT
GTCCATGCTTGTCATTTTATGGGTGTGATGCATAGGGACCTTAAGCCCGA
GAATTTCCTGTTGTCTAGCAAGGATGAGAATGCTCTTTTGAAGGCCACAG
ATTTCGGGTTGTCGGTATTCATTGAAGAGGGAAAGGTGTATCGGGACATA
GTGGGGAGTGCTTACTATGTTGCTCCTGAAGTATTACGGCGTAGATATGG
AAAGGAAATTGATGTTTGGAGTGCAGGAGTTATGTTGTATATCTTGCTCA
GTGGTGTGCCTCCATTTTGGGCAGAAACGGAGAAGGGGATATTTGATGCT
ATTTTGGAAGGAGAAATTGACTTTGAAAGTCAACCATGGCCTTCTATTTC
GGACAGTGCCAAGGAACTAGTCTGCAGGATGTTAACACAGGACCCGAAAA
AGAGGATCACTTCTGCTCAAGTCCTAGAGCATCCATGGATAAGAGAAGGT
GGAAGTGCATCAGACAAGCCACTAGACAGTGCAGTGCTTTCTAGAATGAA
GCAATTCAGAAGAATGAACAAACTAAAGCAACTTGCCTTAAAGGTCATTG
CAGAAAATCTTTCTACTGAAGAAATCCAAGGTCTGAAGCAGATGTTTGCA
AACATTGACACTGACAACAGTGGCACAATCACCTATGATGAACTTAAGAA
TGGATTAGCTCGACTTGGATCAAAGCTCACGGAGGCTGAAGTTCAGCAGC
TGATGGAAGCTGCTGATGTGGATGGAAATGGTAGTATTGACTACATTGAA
TTTATCACTGCTACAATGCACAGACATAGGCTAGAAAGAGACGAACATCT
GTATAAAGCTTTTCAACATTTTGACAAGGACAACAGCGGGTATATCACAA
GAGATGAGCTAGAAACAGCCATGAAAGAATATGGAATGGGTGACAATGAC
ACAATCAAGGAAATAATATCTGAAGTTGACACTGACAATGATGGTAAAAT
CAACTATGAAGAGTTCCGTGACATGATGAGAAGTGGAACCCAACAAGGCC
AACTCTTTTAG
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protein sequence of Tc07v2_p003120.1

>Tc07v2_p003120.1 ID=Tc07v2_p003120.1|Name=Tc07v2_p003120.1|organism=Theobroma cacao|type=polypeptide|length=537bp
MGGCLTKSKEPKPKHNGYRSGATTTVAVHQQRYQEPVRPAPVQPQFHHIP
EKPGAQTPWKPVAPAPSPKPAPRVDTILGKPYEDIRMRYTIGKELGKGQF
GVTYLCTENSTGKQYACKTISKRKLVTKNDKDDMKREIQIMQHLSGQPNI
VEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNV
VHACHFMGVMHRDLKPENFLLSSKDENALLKATDFGLSVFIEEGKVYRDI
VGSAYYVAPEVLRRRYGKEIDVWSAGVMLYILLSGVPPFWAETEKGIFDA
ILEGEIDFESQPWPSISDSAKELVCRMLTQDPKKRITSAQVLEHPWIREG
GSASDKPLDSAVLSRMKQFRRMNKLKQLALKVIAENLSTEEIQGLKQMFA
NIDTDNSGTITYDELKNGLARLGSKLTEAEVQQLMEAADVDGNGSIDYIE
FITATMHRHRLERDEHLYKAFQHFDKDNSGYITRDELETAMKEYGMGDND
TIKEIISEVDTDNDGKINYEEFRDMMRSGTQQGQLF*
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