Tc07v2_t003040.1

Overview
NameTc07v2_t003040.1
Unique NameTc07v2_t003040.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1134
Properties
Property NameValue
NoteATP synthase gamma chain 1, chloroplastic
Model evidenceSupporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
ProductATP synthase gamma chain 1, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593493
GenbankXM_007020746.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g003040Tc07v2_g003040Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p003040.1Tc07v2_p003040.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto360381auto360381Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto360382auto360382Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t003040.1 ID=Tc07v2_t003040.1|Name=Tc07v2_t003040.1|organism=Theobroma cacao|type=mRNA|length=1134bp
ATGTATTCTTCAAATCTACCAACTTGGATCTCATCAAAACCTTCAAATTC
CAACAAAAATGTACTCTTTCATCAATTTAACCGAAACCCATTTGTCCAAT
TCCCTCAAATATTACCCCTCAAAAGCCTCTCTCAATCTCCTTCCCCTTTT
GCTCCAGTTCAAAGCAGTCTTCGTGAGCTCCGAGAGCGGATTGCAACAGT
CAAAAACACTCAAAAAATCACTGAAGCAATGAAGCTGGTGGCAGCTGCAA
AGGTGAGGAGAGCTCAAGAAGCTGTCATCAATGGTAGGCCTTTTACTGAG
GCTTTAGTTGAGTTCCTTTTCACCGTTAGTGAAAATTTACAATGTGAAGA
TATTGATTGTCCTTTAACTGTTATTAGACCTGTAAGGAAAGTAGCTCTCG
TTGTTGTAACTGGCGATAGGGGCCTTTGTGGTAGTTTCAACAATGCAGTG
ATTAAAAAGGCTGAGTCCCGGTTTGCGGAATTGAAAGGTCTTGGATTGGA
TTATACTGTTATTAGTGTAGGGAAAAAAGGTAATTCTTATTTTAGGAGTA
GGGATCATGTTTCGGTTGATAGGTTTGTTGAAGGAGGAGGGTTTCCTACG
GCGAAAGAGGCTCAAATAATTGCTGATGATGTTTTTTCATTATTTGTTAC
TGAAGAGGTTGATAAGGTTGAGCTTGTATATACAAAGTTTGTATCTTTGG
TGAATTCAGATCCAGTAATCCGAACTTTGCTTCCATTGTCAGTGCAAGGA
AAGGTTTTTGATGTGAATGGGACTTGTGTTGATGCTATGGAAGATGAGTT
GTTTAGGTTGACAACCAAGAGCGGGAAGCTGATCGTGGAGAGGGATAGGG
TGAGGATGGAAGGAGGGGGAATTTCACCTCTTATGCAGTTTGAGCAAGAT
CCAGTTCAGATTCTCGATGCCATGATGCCTCTCTATTTGAATAGTCAGAT
CTTGAGGGCATTGCAGGAATCATTGGCGAGTGAGCTGGCAGCTAGAATGA
ACGCAATGAGTAATGCTACTGATAATGCAGTTGAGTTGAGGAAGAATCTT
TCTATTGTTTATAATCGGGAACGACAGGCAAAAATCACTGGTGAGATTTT
GGAGATTGTTGCTGGAGCTGAGGCACTTACATAG
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protein sequence of Tc07v2_p003040.1

>Tc07v2_p003040.1 ID=Tc07v2_p003040.1|Name=Tc07v2_p003040.1|organism=Theobroma cacao|type=polypeptide|length=378bp
MYSSNLPTWISSKPSNSNKNVLFHQFNRNPFVQFPQILPLKSLSQSPSPF
APVQSSLRELRERIATVKNTQKITEAMKLVAAAKVRRAQEAVINGRPFTE
ALVEFLFTVSENLQCEDIDCPLTVIRPVRKVALVVVTGDRGLCGSFNNAV
IKKAESRFAELKGLGLDYTVISVGKKGNSYFRSRDHVSVDRFVEGGGFPT
AKEAQIIADDVFSLFVTEEVDKVELVYTKFVSLVNSDPVIRTLLPLSVQG
KVFDVNGTCVDAMEDELFRLTTKSGKLIVERDRVRMEGGGISPLMQFEQD
PVQILDAMMPLYLNSQILRALQESLASELAARMNAMSNATDNAVELRKNL
SIVYNRERQAKITGEILEIVAGAEALT*
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