Tc07v2_t001560.1

Overview
NameTc07v2_t001560.1
Unique NameTc07v2_t001560.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1626
Properties
Property NameValue
NoteCytochrome P450 71D10
Model evidenceSupporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Productcytochrome P450 71D10
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593322
GenbankXM_007020492.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g001560Tc07v2_g001560Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p001560.1Tc07v2_p001560.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto357569auto357569Theobroma cacaoexon
exon-auto357570auto357570Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto357571auto357571Theobroma cacaoCDS
CDS-auto357572auto357572Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t001560.1 ID=Tc07v2_t001560.1|Name=Tc07v2_t001560.1|organism=Theobroma cacao|type=mRNA|length=1626bp
ATGGAGCTTGAATCTTCCTCCTCCAACTTGTTCCTCATCACCTTCTTTCT
GTTTTTCACAGTAGTCCAACATCTTAAAGCTCAAAAAGCCAAGAAATCTT
TCACCAGGCTTCCTCCAGGGCCATGGAAACTACCTCTCATTGGTAACTTG
CACCAGCTTGTCAGCACTCTACCCCATCACACCCTGAGAGATTTGGCCAA
GAAGTATGGACCTTTGATGTGGTTAAAGCTCGGGGAAGTTCCAACACTTG
TAGTTTCATCCCCGGAAATGGCGAAAGAGGTTATGAGAACCCATGATGTA
ACATTTTGCCAAAGGCCTTATCTGCTGGCTGCTAGCATAATGGGATACAA
TTTCCAAGACATCATCTTTTCACCATATGGAAATTATTGGAGACAGATGA
AGAAAATTTGCATGACGGAGCTTTTGAGTACAAACCGTGTCCAATCATTC
CAATCAATCAGGGAACAAGAGGTGTCAGCTCTCATGGAAATCATATCTTC
GAATGCAAGATCCCCAGTTAATCTCAGTGAGAAAATTTACTCCCTGACGT
ATGGCATAACAGCGAGAGCAGCCTTCGGGAAGAAGAGCGGAGACGAAGAA
GAATTCATAAGGATTGCCATAGAGGTTTCGAAGTTAGCAGGTGGTTTCTG
CTTAGCTGATATGTATCCTTCTAATGAGATGCTGAAATTGATCAGTGGGA
TTAGGCTTAAACTCGAGAAGTTACATAAGGCGTCAGACAGGATACTTGAA
AAGATAATCGATCAACACAAAGAGAGGAGAAACGGAATGGCAAATACAAA
AACAGGAAATAAGAAAGACGAGGAAGATCTGGTTGATATCCTTCTTAAGC
TCCAACAACAAGGTGACCTTGACTTTCCTTTGTCAAAGGATAACATAAAA
GCAGTCATCCAGGATATTTTTGGAGCCGGTAGCGAGGCATCATCAAACAC
AGTGGAATGGGCAATGTCCGAAATGGTAAGAAACCCGAAGCTAATGAAGG
AGGCGCAAGCTGAGGTGAGAAGGGTCTTCCATGGGAAAGGAAAAGTGGAT
GAAGTAGGGCTTGAGGAATTGAAATTCCTGAAGCTCATTGTCAAAGAGAC
CTTGAGATTATACCCTGCTGGACCTCTTTTAATACCAAGGGAATGTAGTG
AGGATTGTGTTATTGGTGGATATGAGATACCTGCCAAGACGAAGGTCATC
GTGAACGCATGGGCAATAGGAAGAGATCCGAGTTATTGGAAGGAAGCAGA
AAAGTTTCAGCCCGAAAGGTTCATCGATAAACCGATTGATTTCAGGGGAA
CAAACTTTGAATATATCCCATTTGGTGCTGGAAGGAGAATGTGTCCTGGA
ATTTCCTTTGCACTACCCAATATCGAGCTACCCCTTGCCAACCTGCTGTA
TCATTTTGATTGGAAACTTCCAAACAAAATGAAGTGTGAAGATCTGGACA
TGACTGAATCATTTGGATTAACTATAAGAAGGAAGAATGATTTGTTTTTG
ATCCCTATTCCTTATCGTTCTTTGTTGAAGATGAAAGTCAGAATGCGTTC
AGCTTCCTATGGCGTGAAAGGATTTAAATGTTTTGGTAAAGTGAAGGCGC
ATCCTCTTCATGTGTTGAGCTTTTAG
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protein sequence of Tc07v2_p001560.1

>Tc07v2_p001560.1 ID=Tc07v2_p001560.1|Name=Tc07v2_p001560.1|organism=Theobroma cacao|type=polypeptide|length=542bp
MELESSSSNLFLITFFLFFTVVQHLKAQKAKKSFTRLPPGPWKLPLIGNL
HQLVSTLPHHTLRDLAKKYGPLMWLKLGEVPTLVVSSPEMAKEVMRTHDV
TFCQRPYLLAASIMGYNFQDIIFSPYGNYWRQMKKICMTELLSTNRVQSF
QSIREQEVSALMEIISSNARSPVNLSEKIYSLTYGITARAAFGKKSGDEE
EFIRIAIEVSKLAGGFCLADMYPSNEMLKLISGIRLKLEKLHKASDRILE
KIIDQHKERRNGMANTKTGNKKDEEDLVDILLKLQQQGDLDFPLSKDNIK
AVIQDIFGAGSEASSNTVEWAMSEMVRNPKLMKEAQAEVRRVFHGKGKVD
EVGLEELKFLKLIVKETLRLYPAGPLLIPRECSEDCVIGGYEIPAKTKVI
VNAWAIGRDPSYWKEAEKFQPERFIDKPIDFRGTNFEYIPFGAGRRMCPG
ISFALPNIELPLANLLYHFDWKLPNKMKCEDLDMTESFGLTIRRKNDLFL
IPIPYRSLLKMKVRMRSASYGVKGFKCFGKVKAHPLHVLSF*
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