Tc07v2_t000620.2

Overview
NameTc07v2_t000620.2
Unique NameTc07v2_t000620.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1437
Properties
Property NameValue
NoteUridine kinase-like protein 3
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Producturidine kinase-like protein 3, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593222
GenbankXM_018124723.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g000620Tc07v2_g000620Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p000620.2Tc07v2_p000620.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto355651auto355651Theobroma cacaoexon
exon-auto355652auto355652Theobroma cacaoexon
exon-auto355653auto355653Theobroma cacaoexon
exon-auto355654auto355654Theobroma cacaoexon
exon-auto355655auto355655Theobroma cacaoexon
exon-auto355656auto355656Theobroma cacaoexon
exon-auto355657auto355657Theobroma cacaoexon
exon-auto355658auto355658Theobroma cacaoexon
exon-auto355659auto355659Theobroma cacaoexon
exon-auto355660auto355660Theobroma cacaoexon
exon-auto355661auto355661Theobroma cacaoexon
exon-auto355662auto355662Theobroma cacaoexon
exon-auto355663auto355663Theobroma cacaoexon
exon-auto355664auto355664Theobroma cacaoexon
exon-auto355665auto355665Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto355666auto355666Theobroma cacaoCDS
CDS-auto355667auto355667Theobroma cacaoCDS
CDS-auto355668auto355668Theobroma cacaoCDS
CDS-auto355669auto355669Theobroma cacaoCDS
CDS-auto355670auto355670Theobroma cacaoCDS
CDS-auto355671auto355671Theobroma cacaoCDS
CDS-auto355672auto355672Theobroma cacaoCDS
CDS-auto355673auto355673Theobroma cacaoCDS
CDS-auto355674auto355674Theobroma cacaoCDS
CDS-auto355675auto355675Theobroma cacaoCDS
CDS-auto355676auto355676Theobroma cacaoCDS
CDS-auto355677auto355677Theobroma cacaoCDS
CDS-auto355678auto355678Theobroma cacaoCDS
CDS-auto355679auto355679Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t000620.2 ID=Tc07v2_t000620.2|Name=Tc07v2_t000620.2|organism=Theobroma cacao|type=mRNA|length=1437bp
ATGGGTTCTAAATCAGTTGAGGATATGATAGAGGCCTCAACAGGGGTCCA
TTTTTCTGGGTTCCATATGGATGGTTTGGAGTCAAGAAATATTGAGAAGC
CTACAACCTCACCGGCTACTGAAAACTTGCATAAACAACCTTTTGTTATC
GGAGTTGCTGGGGGAGCAGCATCTGGTAAGACTACTGTCTGTGATATGAT
TATTCAGCAACTTCATGATCAGCGTGTAGTATTAGTTAATCAGGATTCCT
TTTATCACAATCTCACTGAAGAGGAACTTGCAAGAGTTCATGAATACAAC
TTTGACCATCCTGATGCATTCAACACAGAGAAATTATTAGATTCTATGGA
GAACTTGAGGCATGGCCAAGCCGTAGATATTCCAAACTATGATTTCAAGA
GTTATAAAAATAATGTTTTTCCAGCAAGAAGGGTTAATCCTTCAGATGTT
ATAATTTTGGAAGGAATACTTATTTTTCATGATCCTCGTGTCCGAGAGTT
GATGAACATGAAAATATTTGTTGATACAGATGCTGATGTACGACTGGCAA
GGAGAATAAGGCGTGATACAGTTGAGAAGCACCGAGATATTGGTGCTGTT
CTTGATCAGTATTCAAAATTTGTGAAGCCTGCTTTTGATGACTTTATACT
TCCAACAAAGAAGTATGCAGACATTATCATTCCCCGTGGGGGAGATAACC
ATGTAGCAATTGATTTGATCGTGCAGCATATTAGGACAAAGCTTGGCCAG
CATGATCTCTGTAAAATCTACCCAAACCTTTATGTCATTCAATCAACTTT
TCAGATACGAGGCATGCATACCCTCATTCGTGACTCTCAAACAACGAAAC
ATGACTTTGTTTTTTATGCTGATCGGTTGATTCGCTTGGTTGTTGAACAT
GGGCTGGGACATCTGCCATTTACAGAAAAGCAGGTGATCACTCCAACTGG
GTCTGTATATACAGGTGTGGATTTCTGTAAGAGGTTATGTGGTGTCTCTG
TTATTAGGAGTGGTGAGAGTATGGAGAATGCTTTGCGAGCATGTTGCAAA
GGTATCAAGATTGGCAAGATTCTTATTCATAGGGAAGGCGACAACGGTCA
GCAGCTTATTTATGAAAAATTACCACAAGACATCTCAGAAAGGCATGTGC
TGCTACTGGATCCGATTCTAGGCACAGGCAATTCAGCTGTTCAAGCTATT
TCCTTACTTATTAAAAAGGGTGTACCCGAGTCCAACATCATATTTCTCAA
TCTCATATCCGCACCTCAAGGCGTACATGTGGTGTGCAAAAGCTTCCCAA
GATTAAAGATTGTGACATCTGAGATTGATATTGGTTTAAATGAAGATTTC
CGCGTTGTCCCTGGTATGGGTGAGTTTGGAGATCGATATTTTGGAACAGA
TGATGATGACCAGCAAGTGGTGGCCCCTAAGCAATAG
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protein sequence of Tc07v2_p000620.2

>Tc07v2_p000620.2 ID=Tc07v2_p000620.2|Name=Tc07v2_p000620.2|organism=Theobroma cacao|type=polypeptide|length=479bp
MGSKSVEDMIEASTGVHFSGFHMDGLESRNIEKPTTSPATENLHKQPFVI
GVAGGAASGKTTVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELARVHEYN
FDHPDAFNTEKLLDSMENLRHGQAVDIPNYDFKSYKNNVFPARRVNPSDV
IILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIRRDTVEKHRDIGAV
LDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQ
HDLCKIYPNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVVEH
GLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCK
GIKIGKILIHREGDNGQQLIYEKLPQDISERHVLLLDPILGTGNSAVQAI
SLLIKKGVPESNIIFLNLISAPQGVHVVCKSFPRLKIVTSEIDIGLNEDF
RVVPGMGEFGDRYFGTDDDDQQVVAPKQ*
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