Tc07v2_t000070.3

Overview
NameTc07v2_t000070.3
Unique NameTc07v2_t000070.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2205
Properties
Property NameValue
NoteProbable WRKY transcription factor 2
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
Productprobable WRKY transcription factor 2, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593160
GenbankXM_007020242.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g000070Tc07v2_g000070Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p000070.3Tc07v2_p000070.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto354118auto354118Theobroma cacaoexon
exon-auto354119auto354119Theobroma cacaoexon
exon-auto354120auto354120Theobroma cacaoexon
exon-auto354121auto354121Theobroma cacaoexon
exon-auto354122auto354122Theobroma cacaoexon
exon-auto354123auto354123Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto354124auto354124Theobroma cacaoCDS
CDS-auto354125auto354125Theobroma cacaoCDS
CDS-auto354126auto354126Theobroma cacaoCDS
CDS-auto354127auto354127Theobroma cacaoCDS
CDS-auto354128auto354128Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t000070.3 ID=Tc07v2_t000070.3|Name=Tc07v2_t000070.3|organism=Theobroma cacao|type=mRNA|length=2205bp
ATGGCTGGTATTAATGATAATGTTGCTATTATTGGAGACTGGATACCTCC
TACTCCCAGCCCAAGAACATTTTTTGCAGCTCTGTTAGGTGATGATATTG
GCTCAAAACCAGTCTCAGAAACTCATGGGGAAAATAAAACTGAGGGACTC
TTTCTGGGATCTCGAGGGATAATGACAGCAGAGAATAGTGACAATAAGGA
TGCTCACCAAGGTCATGAACAATTGAAAGAATTTGGGTCGATTTCTGAGC
AAAAATCCAGTTCACGGGGAGGTCTGGTGGAAAGGATGGCAGCCAGAGCT
GGATTTAATGCTCCAAGATTGAATACTGAAAGCATCAGGTCTGCTGACCT
TTCACTTAACCCTGAAATTTGTTCTCCTTACTTGACAATACCTCCTGGTC
TCAGCCCAACAACACTGCTAGAATCTCCAGTTTTCGTCTCAAATTCGTTG
GCACAGCCATCTCCGACTACTGGAAAATTCCCTTTTATTCCTAATGGTAA
TGGTCGGAGTTCTTTCTCGGAGTCCTCTGATAAAAGTAAAGATAACTATT
TTGAGGACATCAATGCATCATCATTTGCATTCAAGCCTTTTGCAGAATCA
AATTCCTCTTTTCTCCTTGGTGCAATGAGCAAAATTACTCCAGCCAGTGT
TCCTCAGCAGTCATTTCCAAATATTGAGGTTTCGGTTCAGTCTGAAAATC
CCCTTCCATCTCAAAATGTAGACCCAGGGAAAGTCCACTCTCAGAACAGC
AACAGGCCCTCCCTTCAGGCAGATTTCTCTAGATCATCAACTGAAAAAGA
CACTGGGAGTAACAACTCTGCAGATCAAAGGGTCTTTGATCCTGTTGGTG
GGACTGCTGAAAATTCACAGCCTCTTGATGAGCCACAGGATGAAGAAGGA
GATCAAAGAGGTAGTGGGGATTGCATGGCTGGTGGTGTTGGCAGTGCACC
ATCTGATGATGGATATAATTGGAGAAAATATGGACAAAAACAAGTAAAAG
GCAGTGAGTATCCTCGTAGTTATTACAAGTGCACACATCCAAATTGTCAG
GTTAAGAAGAAGGTGGAACGTTCTCATGAAGGTCACATAACAGAGATCAT
ATACAAGGGAGCTCACAACCATCCCAAGCCTCCACCCAATCGCCGATCAG
CCATTGGATCATCCAACCCACTAACTGACATGCAACCAGAAGTCCCTGAA
CAACCTGGCCTTCAGAATGGTACTGATGGTGATCCTGTTTGGGCAACTGG
ACAGAAGGGAACAGTTGCTGCTACTCATGATTGGAGGCATGACAGCATTG
AGGTGACATCATCTGCACCTGTAGGTCCTGAGTATGGCAATGTGCAGGCC
CCAAATGGCACTCACTTTGAATCAGGTGATGCAGTCGATGCCTCATCTAC
CTTCTCTAATGATGAAGATGAAGATGATCGGGGGACACATGGCAGTGTCT
CATTAGGTTATGATGGTGAAGGAGATGAATCTGAGTCAAAGAGAAGGAAA
ATTGAAGCTTATGCACCAGAAATGAGTGGAGCCACGCGAGCTATTCGTGA
GCCTAGGGTTGTGGTCCAGACAACCAGTGAGGTGGATATCCTAGATGATG
GATATCGGTGGCGCAAGTATGGCCAGAAAGTAGTGAAAGGAAATCCAAAT
CCAAGGAGTTATTACAAATGCACTAGTGCGGGCTGCACAGTGAGGAAGCA
TGTGGAGAGGGCATCACATGACCTCAAGTCAGTAATTACTACCTATGAAG
GAAAGCACAACCATGATGTTCCTGCTGCTCGTAGTAGCAGTCATGTCAAT
TCTGCTACCTGTAGCACAGTAACTGCCCAAGGTGCTTCCTCTGTCCAAAC
ACATGTCCACAGGCCGGAGCCATCACAACTTCACAACAGCATGGTTAGAC
CTGCATCATTTGGTCCATATACCCTGCCTGGAAGGCAGCAGCTGGGGCCT
TCTCCTGGCTTCTCCTTTGGAATGAATCAACCAGGCCTGGCCAATTTGGC
AATGGCTGGGTTGGGTCCTGGCCAAGCTAAGCTGCCAGTTCTGCCTGTTC
ATCCATTCATGCCTCAGCAACGCCAGATGAATGAAATGGGTTTCATGCTG
CCAAAAGGAGAACCAAAGATGGAGCCAATGTCTGAACCTGGTTTGAATCT
TTCAAACAACTCAACAGTATACCAGCAAATTATGAGTAGGCTGCCTCAGA
TGTAA
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protein sequence of Tc07v2_p000070.3

>Tc07v2_p000070.3 ID=Tc07v2_p000070.3|Name=Tc07v2_p000070.3|organism=Theobroma cacao|type=polypeptide|length=735bp
MAGINDNVAIIGDWIPPTPSPRTFFAALLGDDIGSKPVSETHGENKTEGL
FLGSRGIMTAENSDNKDAHQGHEQLKEFGSISEQKSSSRGGLVERMAARA
GFNAPRLNTESIRSADLSLNPEICSPYLTIPPGLSPTTLLESPVFVSNSL
AQPSPTTGKFPFIPNGNGRSSFSESSDKSKDNYFEDINASSFAFKPFAES
NSSFLLGAMSKITPASVPQQSFPNIEVSVQSENPLPSQNVDPGKVHSQNS
NRPSLQADFSRSSTEKDTGSNNSADQRVFDPVGGTAENSQPLDEPQDEEG
DQRGSGDCMAGGVGSAPSDDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQ
VKKKVERSHEGHITEIIYKGAHNHPKPPPNRRSAIGSSNPLTDMQPEVPE
QPGLQNGTDGDPVWATGQKGTVAATHDWRHDSIEVTSSAPVGPEYGNVQA
PNGTHFESGDAVDASSTFSNDEDEDDRGTHGSVSLGYDGEGDESESKRRK
IEAYAPEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPN
PRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHVN
SATCSTVTAQGASSVQTHVHRPEPSQLHNSMVRPASFGPYTLPGRQQLGP
SPGFSFGMNQPGLANLAMAGLGPGQAKLPVLPVHPFMPQQRQMNEMGFML
PKGEPKMEPMSEPGLNLSNNSTVYQQIMSRLPQM*
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