Tc06v2_t019800.2

Overview
NameTc06v2_t019800.2
Unique NameTc06v2_t019800.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length897
Properties
Property NameValue
NoteHypothetical protein
Model evidenceSupporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Productkeratin-associated protein 5-3, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597332
GenbankXM_018123136.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g019800Tc06v2_g019800Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p019800.2Tc06v2_p019800.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto352555auto352555Theobroma cacaoexon
exon-auto352556auto352556Theobroma cacaoexon
exon-auto352557auto352557Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto352558auto352558Theobroma cacaoCDS
CDS-auto352559auto352559Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t019800.2 ID=Tc06v2_t019800.2|Name=Tc06v2_t019800.2|organism=Theobroma cacao|type=mRNA|length=897bp
ATGGTGTTGAAAGTAGACCTCCAGTGCTACCGCTGCTATAAGAAGGTCAA
GAAAGTGCTCTGTAAATTTCCAGAAATAAGAGATCAGAAATACGATGAGA
AGGCAAACACTGTGACGATCAGTGTGGTATCTAGAAATCCTGAGTCTATC
AGGAGCAAGATATGCGACAAGGCCGGTTGTTGCATTAAAAGCATTGAGAT
TAAACCTAAAGATAAACCTGGTACTGATAAGGTTACAAAAACTACAGAGA
AAGATAAATCTGGCAAGGATAAAACTAAAGAGCCTGAGAAGAAAGAATAC
CAAACGATTAATATAGTAGGGATATTTTGTAAGGAATGCCATATGTGGCA
TCGAGAAGGGCCGTGCGAGAAGAGTAAGGGTGTTCCATTCAGACTCGCAT
GCAATGAGAATTGTGGGAAAAGAGTTTGGTGTGGTGGGTGTGGCGGTAGT
GGGTGCAAAAGCTGCTCAGGTCATGGGTGGATCAGCTGGTATTGTAGCAA
TTGTAGCAGCAAGCCTTGTAAAGGGTGTGGCAGCTCTTCCTGTACCGGAT
GCAACGGCTTGTCTTGGTCTTGTAGTGGGCACGGCAACTGGCACTGTAAA
GGTTGCGGCAGCTCTTCTTGCAACGGCCGATCTTGCGGTGGGTGCAACAA
CTGGGCGTGTAAAGGGTGCGGCAGCTCATCCTGTGGCGGGTGCAACGGCT
GGTCTTGTAGTGGATACAGTAGCTGGTCTTGTAAAGGGTGCGGCAGCTCT
TCTTGCAGCGGCTGCAACGGCGGGTCATGCAAGCGGTGCGGTAACTTTTC
CTGCAGTGGTTGTAGTGGATGTTCTTGCGGTAGGTGCACAAGCTGTTCTC
TAAGCCGTTGTCACTACGAAGAAAGATCAAGTTGTATAATAATGTAA
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protein sequence of Tc06v2_p019800.2

>Tc06v2_p019800.2 ID=Tc06v2_p019800.2|Name=Tc06v2_p019800.2|organism=Theobroma cacao|type=polypeptide|length=299bp
MVLKVDLQCYRCYKKVKKVLCKFPEIRDQKYDEKANTVTISVVSRNPESI
RSKICDKAGCCIKSIEIKPKDKPGTDKVTKTTEKDKSGKDKTKEPEKKEY
QTINIVGIFCKECHMWHREGPCEKSKGVPFRLACNENCGKRVWCGGCGGS
GCKSCSGHGWISWYCSNCSSKPCKGCGSSSCTGCNGLSWSCSGHGNWHCK
GCGSSSCNGRSCGGCNNWACKGCGSSSCGGCNGWSCSGYSSWSCKGCGSS
SCSGCNGGSCKRCGNFSCSGCSGCSCGRCTSCSLSRCHYEERSSCIIM*
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