Tc06v2_t019430.7

Overview
NameTc06v2_t019430.7
Unique NameTc06v2_t019430.7
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length738
Properties
Property NameValue
NoteRas-related protein RABA5a
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 167 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Productras-related protein RABA5a, transcript variant X3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597293
GenbankXM_018123119.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g019430Tc06v2_g019430Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p019430.7Tc06v2_p019430.7Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto351868auto351868Theobroma cacaoexon
exon-auto351869auto351869Theobroma cacaoexon
exon-auto351870auto351870Theobroma cacaoexon
exon-auto351871auto351871Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto351872auto351872Theobroma cacaoCDS
CDS-auto351873auto351873Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t019430.7 ID=Tc06v2_t019430.7|Name=Tc06v2_t019430.7|organism=Theobroma cacao|type=mRNA|length=738bp
ATGCAGTATGCTATTCATTGTTGTTATGGTTCTATAGAGTGGCAATCCTT
GGGAGGTTGGAAAATGGCTTTTGTTTCGGAGGAAGAGAAAACTGAGGATT
ATCTTTTCAAGATTGTACTCATTGGTGATTCAGCTGTTGGGAAATCAAAT
TTACTTGCAAGATTTGCTAGGGATGAGTTCTATCCTAATTCAAAGTCAAC
CATAGGAGTAGAGTTTCAAACCCAGAAGATGGATATTAATGGGAAGGAAA
TTAAGGCGCAGATCTGGGATACGGCTGGTCAGGAGCGCTTCAGGGCTGTT
ACATCTGCATATTACCGAGGTGCAGTCGGAGCTCTCCTTGTGTATGACAT
CAGTAGACGACAGACTTTTGATAGCATTGGTAGATGGCTAAATGAACTTC
ACACTCACTCTGACATGAATGTAGTCACCATTCTAGTAGGCAACAAGTCA
GATCTCAGGGATGCCAGGGAAGTATCCACTGCTGAAGGAAAGGCCCTGGC
AGAGGCACAGGGGTTGTTTTTCATGGAGACATCTGCCCTTGATTCCTCTA
ATGTAGCAGCTGCCTTTCAGACTGTTGTTAAAGAGATCTACAACATATTG
AGCCGAAAAGTTATGATATCTCATGAGCTCAAGAAGCAGGATGCTTCATT
GAACGGAAAGACTGTGGTGTTACACGGGGATGAGACCCAACAATCTGATA
CAGGGGCTAAAAAGGGTGGGTGGTGCTGTTCATCCTGA
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protein sequence of Tc06v2_p019430.7

>Tc06v2_p019430.7 ID=Tc06v2_p019430.7|Name=Tc06v2_p019430.7|organism=Theobroma cacao|type=polypeptide|length=246bp
MQYAIHCCYGSIEWQSLGGWKMAFVSEEEKTEDYLFKIVLIGDSAVGKSN
LLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQERFRAV
TSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS
DLRDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNIL
SRKVMISHELKKQDASLNGKTVVLHGDETQQSDTGAKKGGWCCSS*
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