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Properties
| Property Name | Value |
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| Note | Transcription initiation factor IIF subunit alpha |
| Model evidence | Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns |
| Product | transcription initiation factor IIF subunit alpha, transcript variant X2 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc06v2_t019170.2 ID=Tc06v2_t019170.2|Name=Tc06v2_t019170.2|organism=Theobroma cacao|type=mRNA|length=1569bp
ATGACCTTGTGCGTGACGTGTGGCAAAACCATGGCAGAGAACCAAGGCAA
ATGCTTCGAATGTGGCGCCATTGTTACCCGCTTGATTCGTGAATACAACG
TTAGACCAAGTCCTAGCACCGACAAGAACTTCTTTATTGGTCGGTTTATG
AGTGGGTTGCCCAGTTTTTCAAAGAAGAAAAACGCTGAGAATAAATGGTC
TCTGCAAAAAGAAGGACTGCAAGGACGCCAACTTACTGATCCTTTGCGGG
AAAAATATAAGAACAAACCTTGGATGTTGGAGGACGAAACAGGCCAGGCT
CAGTATCAGGGCCATCTGGAAGGTTCACAGTCAGCAACTTATTACTTGCT
TATGATGCAAGGAAAGGAATTTGTAGCTATTCCGGCTGGTTCTTGGTACA
ATTTCAACAAGGTTGCACAATATAAACAACTTACATTGGAAGAAGCAGAA
GAAAAAATGAAGAACAGGAGGAAGACTGCAGATGGATATGAGAGATGGAT
GATGAAAGCTGCAAACAATGGAGCTGCTGCATTTGGCGAAGTGGAGAAGT
TTGATGACAAGGATAACAGTGTGGCTGGTGGTAAGGGGCGTAAAAAACCA
ACTGGTGATGATGATGAAGGTCATGTATCAGATAGAGGAGAGGAAGATGA
AGAAGAGGAGGCAGCTAGAAAGAATAGGCTTGGACTCGACAAAAAAGGTG
GTGATGATGATGAAGAAGGTCCAAGGGGAGGTGATCTTGATATGGATGAT
GATGATATTGAGAAGGGTGATGATTGGGAGCATGAAGAAATATTCACTGA
TGATGATGAAGCTGTTGGTAATGAACCTGAGGAAAGGGATCTGGCCCCAG
AAGTTCCTGCTCCTCCGGAAATTAAGGAGGACGAAGATGAGGAGGATGAA
GAGCAGGAAGGAGGACTGAGTAAGTCTGGAAAAGAGTTGAAGAAGTTACT
AGGGAAAGCTGGTGGGCTTAATGATTCAGATGCAGATGATGATGATGACG
ATGACGATGACGATGATATGAGCTTTAATCCTGCTCCAGCCTCTAAACAG
AAGGATGCACCTAAAGAAGAACCTGCTGATAACAGTCCAATGAAACCAGC
ATCTTCAGCTTCTGCTCGGGGAACTTCAACTGCATCTAAGTCAGCAAAGG
GAAAGAGAAAAGCAAATGGTGATGATACAAAAGCATCTAATGGTACCCCT
CTGAAGAAGGTTAAATCAGAAACTGATTCAAAATCTTCTGTGAAAGAGGA
AAGCGCATCTGCTTCCAAAGGCAGTGTGCCTCCCAAAGGCACACCATCAT
CTGCAAAAGCTGGATCAACATCATCGGCTGTTACATCATCATCTGCAAAA
GCAGGATCAGCATCAACTGCTGGACCTGTAACTGAAGAAGAAATTAGGGC
CGTTTTATTGCAAAAGGCACCTGTAACGACCTCAGATCTTGTTGCTAAAT
TTAAAGCTAGGCTAAAATCTCCGGAGGACAAGAAGGCTTTCGCAGATATT
CTTAGGCGAATTTCTAAGATACAAAAGACGAATGGACCTAATAACTACGT
CGTCTTGAGAGATAAGTAA back to topprotein sequence of Tc06v2_p019170.2 >Tc06v2_p019170.2 ID=Tc06v2_p019170.2|Name=Tc06v2_p019170.2|organism=Theobroma cacao|type=polypeptide|length=523bp
MTLCVTCGKTMAENQGKCFECGAIVTRLIREYNVRPSPSTDKNFFIGRFM
SGLPSFSKKKNAENKWSLQKEGLQGRQLTDPLREKYKNKPWMLEDETGQA
QYQGHLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAE
EKMKNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRKKP
TGDDDEGHVSDRGEEDEEEEAARKNRLGLDKKGGDDDEEGPRGGDLDMDD
DDIEKGDDWEHEEIFTDDDEAVGNEPEERDLAPEVPAPPEIKEDEDEEDE
EQEGGLSKSGKELKKLLGKAGGLNDSDADDDDDDDDDDDMSFNPAPASKQ
KDAPKEEPADNSPMKPASSASARGTSTASKSAKGKRKANGDDTKASNGTP
LKKVKSETDSKSSVKEESASASKGSVPPKGTPSSAKAGSTSSAVTSSSAK
AGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADI
LRRISKIQKTNGPNNYVVLRDK* back to top
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