Tc06v2_t018940.1

Overview
NameTc06v2_t018940.1
Unique NameTc06v2_t018940.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length960
Properties
Property NameValue
Note1-aminocyclopropane-1-carboxylate oxidase
Model evidenceSupporting evidence includes similarity to: 9 ESTs, 52 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Product1-aminocyclopropane-1-carboxylate oxidase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597239
GenbankXM_007026145.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g018940Tc06v2_g018940Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p018940.1Tc06v2_p018940.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto350951auto350951Theobroma cacaoexon
exon-auto350952auto350952Theobroma cacaoexon
exon-auto350953auto350953Theobroma cacaoexon
exon-auto350954auto350954Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto350955auto350955Theobroma cacaoCDS
CDS-auto350956auto350956Theobroma cacaoCDS
CDS-auto350957auto350957Theobroma cacaoCDS
CDS-auto350958auto350958Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t018940.1 ID=Tc06v2_t018940.1|Name=Tc06v2_t018940.1|organism=Theobroma cacao|type=mRNA|length=960bp
ATGGAGACCACTTTCCCTGTCATTGACTTCTCCAAACTCGATGGTGAGGA
GAGAGGAGCCACCATGGAAATGATCAAAGATGCCTGTGAGAATTGGGGTT
TCTTTGAGCTGATGAACCATGGGATATCTCATGAGCTGTTGGACACCGTG
GAGAGGCTGACAAAGGAGCACTACAGAAAGTGCATGGAGCAGAGGTTCAA
AGAAATGGTGGCGAGTAAGGGTCTTGAGGCTGTTCAATTTGAGATCAATG
ATTTGGATTGGGAAAGCACCTTCTTCTTGCGCCACTTGCCTGAATCAAAC
ATATCCGAAATCCCTGATCTTGAAGAAGAATACAGAAAGGTAATGAAGGA
GTTTGCAGTGGAGTTGGAGAAGCTGGCAGAGCAACTTTTGGACTTGTTGT
GTGAGAATCTTGGGTTGGAGAAGGGGTACCTGAAAAATGTCTTTTATGGG
TCCAGAGGGCCAACCTTTGGCACCAAGGTCAGCAACTACCCTCCATGCCC
TAAGCCAGACCTTATCAAGGGCCTCAGGGCTCACACAGATGCTGGTGGCA
TCATCTTACTCTTCCAAGATGACAAGGTCAGCGGCCTTCAGCTCCTCAAG
GATGACCAGTGGATCGATGTTCCTCCGATGAAGCACTCCATTGTGATCAA
CCTTGGTGACCAAGTTGAGGTGATCACCAATGGCAAGTATAAGAGTGTGT
TGCATCGTGTGATCGCTCAAACAGATGGTACAAGGATGTCTATTGCTTCC
TTTTACAACCCGGGCAGTGATGCTGTCATATATCCAGCACCAGCTTTACT
CGAGAAAGAAGCTGAGACATCCCAGTTGTATCCCAAATTCGTGTTTGAGG
ACTACATGAAGCTCTACGCTGGCCTCAAGTTCCAGGCCAAGGAGCCAAGG
TTCGAAGCCATGAAGACCATGGAGTCATCAGTTAAATTGGGTCCTATTGC
AACTGTTTAA
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protein sequence of Tc06v2_p018940.1

>Tc06v2_p018940.1 ID=Tc06v2_p018940.1|Name=Tc06v2_p018940.1|organism=Theobroma cacao|type=polypeptide|length=320bp
METTFPVIDFSKLDGEERGATMEMIKDACENWGFFELMNHGISHELLDTV
ERLTKEHYRKCMEQRFKEMVASKGLEAVQFEINDLDWESTFFLRHLPESN
ISEIPDLEEEYRKVMKEFAVELEKLAEQLLDLLCENLGLEKGYLKNVFYG
SRGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK
DDQWIDVPPMKHSIVINLGDQVEVITNGKYKSVLHRVIAQTDGTRMSIAS
FYNPGSDAVIYPAPALLEKEAETSQLYPKFVFEDYMKLYAGLKFQAKEPR
FEAMKTMESSVKLGPIATV*
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