Tc06v2_t018860.1

Overview
NameTc06v2_t018860.1
Unique NameTc06v2_t018860.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1704
Properties
Property NameValue
NotePyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta
Model evidenceSupporting evidence includes similarity to: 18 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productpyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597231
GenbankXM_007026135.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g018860Tc06v2_g018860Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p018860.1Tc06v2_p018860.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto350833auto350833Theobroma cacaoexon
exon-auto350834auto350834Theobroma cacaoexon
exon-auto350835auto350835Theobroma cacaoexon
exon-auto350836auto350836Theobroma cacaoexon
exon-auto350837auto350837Theobroma cacaoexon
exon-auto350838auto350838Theobroma cacaoexon
exon-auto350839auto350839Theobroma cacaoexon
exon-auto350840auto350840Theobroma cacaoexon
exon-auto350841auto350841Theobroma cacaoexon
exon-auto350842auto350842Theobroma cacaoexon
exon-auto350843auto350843Theobroma cacaoexon
exon-auto350844auto350844Theobroma cacaoexon
exon-auto350845auto350845Theobroma cacaoexon
exon-auto350846auto350846Theobroma cacaoexon
exon-auto350847auto350847Theobroma cacaoexon
exon-auto350848auto350848Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto350849auto350849Theobroma cacaoCDS
CDS-auto350850auto350850Theobroma cacaoCDS
CDS-auto350851auto350851Theobroma cacaoCDS
CDS-auto350852auto350852Theobroma cacaoCDS
CDS-auto350853auto350853Theobroma cacaoCDS
CDS-auto350854auto350854Theobroma cacaoCDS
CDS-auto350855auto350855Theobroma cacaoCDS
CDS-auto350856auto350856Theobroma cacaoCDS
CDS-auto350857auto350857Theobroma cacaoCDS
CDS-auto350858auto350858Theobroma cacaoCDS
CDS-auto350859auto350859Theobroma cacaoCDS
CDS-auto350860auto350860Theobroma cacaoCDS
CDS-auto350861auto350861Theobroma cacaoCDS
CDS-auto350862auto350862Theobroma cacaoCDS
CDS-auto350863auto350863Theobroma cacaoCDS
CDS-auto350864auto350864Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t018860.1 ID=Tc06v2_t018860.1|Name=Tc06v2_t018860.1|organism=Theobroma cacao|type=mRNA|length=1704bp
ATGTCTCCGTCTTTGGTCACTAATAACGGCGATGTCGCCACCGTGAAAAC
CGCTCCGGTTGCCGGACGTTTAGCAGCTGTTTACAGTGAGGTGCAAACGA
GTCGTATCGACCACGCTCTTCCTCTCCCTTCTGTTCTCAGAAATCCCTTC
AAAATCGTAGACGGTCCGCCTAGCTCCGCCGCTGGCAACCCTGATGAGAT
TGCGAAATTGTTTCCAAATCTGTTCGGGCAACCATCTGCAATGTTGGTGC
CAAACGGAGCTGACTCTATCGGATCTTATCAGAAACTGAAGATCGGCGTC
GTTTTGTCTGGAGGACAGGCACCTGGAGGTCACAATGTGATTTCCGGAAT
CTTCGATTACTTGCAGGATTGCGCGAAAGGTAGCATTTTGTATGGATTTA
GGGGAGGTCCTGCTGGGATCATGAAATGCAAATACGTAGAATTGACTGCA
GATTATATTTACCCCTACAGAAATCAGGGTGGCTTTGATATGATCTGTAG
TGGGAGAGACAAGATTGAAACTCCTGAGCAGTTTAAGCAAGCTGAAGAAA
CAGCGGTGAAGCTTGATTTGGATGGGCTTCTTGTTATTGGTGGGGATGAC
TCAAACACAAATGCTTGCCTCCTTGCTGAAAATTTCAGGGCTAAAAATTT
GAAAACTCAAGTGATTGGATGCCCAAAAACCATCGATGGTGATTTGAAAT
GCAAAGAGGTTCCAACCAGTTTTGGATTTGACACTGCTTGCAGGATATAT
GCTGAAATGATTGGAAACGTCATGATTGATGCACGATCAACTGGAAAATA
TTATCATTTTGTACGGCTCATGGGGCGTGCAGCTTCACACATTACTTTGG
AGTGTGCTTTGCAGACTCACCCTAACATTACCATTATTGGAGAAGAGGTT
GCTGCCAAGAAGCAGACGCTGAAAAATGTCACAGACTACATAGTTGATGT
TGTTTGCAAACGTGCTGAACTTGGTTACAACTATGGGGTTATTCTCATTC
CTGAAGGTCTCATTGACTTCATTCCTGAGGTCCAGCAGCTCATTGCTGAA
CTAAATGAAATTCTGGCTCATGATATTGTTGATGAAAATGGGCTATGGAA
AAAGAAACTTACTGATCAATCTTTGAAGCTTTTTGAGTTCTTACCTCAAG
CAATCCAAGAACAATTGATGCTTGAAAGAGACCCGCATGGAAATGTTCAG
GTTGCAAAAATAGAAACGGAGAAAATGCTCATTCAAATGGTCGAAACTGA
ATTGGAGAAGAGGAAGCAGGAAGGCTCTTATAAAGGCCAGTTTAAAGGAC
AGTCGCACTTTTTCGGATATGAAGGAAGATGTGGTTTGCCAACTAACTTC
GATGCATCCTACTGCTATGCATTGGGCTACGGTGCTGGAGCTCTCCTCCA
CAGTGGAAAAACAGGGTTGATATCATCGGTAGGAAATTTGGGTGCCCCAG
TTGAAGAATGGACTGTGGGAGGGACTGCTTTGACATCATTAATGGATGTG
GAGAGGAGGCATGGTAAATTAAAGCCTGTGATCAAGAAGGCAATGGTAGA
ACTGGAAGGTGCACCATTCAAGAAATTTTCTTCCATGCGGGAGGAGTGGG
CTCTTAAGAATTGCTACATTAGTCCCGGACCTATTCAATTTGTTGGGCCA
GTTTCCAATGCAGTTAACCACACTCTGCTCCTTGAACTCGGTGCTCAAGC
TTAG
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protein sequence of Tc06v2_p018860.1

>Tc06v2_p018860.1 ID=Tc06v2_p018860.1|Name=Tc06v2_p018860.1|organism=Theobroma cacao|type=polypeptide|length=568bp
MSPSLVTNNGDVATVKTAPVAGRLAAVYSEVQTSRIDHALPLPSVLRNPF
KIVDGPPSSAAGNPDEIAKLFPNLFGQPSAMLVPNGADSIGSYQKLKIGV
VLSGGQAPGGHNVISGIFDYLQDCAKGSILYGFRGGPAGIMKCKYVELTA
DYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAVKLDLDGLLVIGGDD
SNTNACLLAENFRAKNLKTQVIGCPKTIDGDLKCKEVPTSFGFDTACRIY
AEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEV
AAKKQTLKNVTDYIVDVVCKRAELGYNYGVILIPEGLIDFIPEVQQLIAE
LNEILAHDIVDENGLWKKKLTDQSLKLFEFLPQAIQEQLMLERDPHGNVQ
VAKIETEKMLIQMVETELEKRKQEGSYKGQFKGQSHFFGYEGRCGLPTNF
DASYCYALGYGAGALLHSGKTGLISSVGNLGAPVEEWTVGGTALTSLMDV
ERRHGKLKPVIKKAMVELEGAPFKKFSSMREEWALKNCYISPGPIQFVGP
VSNAVNHTLLLELGAQA*
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