Tc06v2_t017810.3

Overview
NameTc06v2_t017810.3
Unique NameTc06v2_t017810.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1461
Properties
Property NameValue
NoteBeta-glucosidase 46
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Productbeta-glucosidase 46, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597115
GenbankXM_018123078.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g017810Tc06v2_g017810Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p017810.3Tc06v2_p017810.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto348596auto348596Theobroma cacaoexon
exon-auto348597auto348597Theobroma cacaoexon
exon-auto348598auto348598Theobroma cacaoexon
exon-auto348599auto348599Theobroma cacaoexon
exon-auto348600auto348600Theobroma cacaoexon
exon-auto348601auto348601Theobroma cacaoexon
exon-auto348602auto348602Theobroma cacaoexon
exon-auto348603auto348603Theobroma cacaoexon
exon-auto348604auto348604Theobroma cacaoexon
exon-auto348605auto348605Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto348606auto348606Theobroma cacaoCDS
CDS-auto348607auto348607Theobroma cacaoCDS
CDS-auto348608auto348608Theobroma cacaoCDS
CDS-auto348609auto348609Theobroma cacaoCDS
CDS-auto348610auto348610Theobroma cacaoCDS
CDS-auto348611auto348611Theobroma cacaoCDS
CDS-auto348612auto348612Theobroma cacaoCDS
CDS-auto348613auto348613Theobroma cacaoCDS
CDS-auto348614auto348614Theobroma cacaoCDS
CDS-auto348615auto348615Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t017810.3 ID=Tc06v2_t017810.3|Name=Tc06v2_t017810.3|organism=Theobroma cacao|type=mRNA|length=1461bp
ATGGATGTTTCCAGAATGCTTTGCATTGGTTTCTTTCTCTTGCAGGTGTT
CTTGTTACCTCTCTCCATCTCATCCGAGCTGCTAACTCTGGAACAAAGCT
TGGGTAATCTGTCCGCATTTCCTCCCAACTTTCTCTTCGGAACGGCCTCT
TCTGCTTACCAGGAAGACATTGATCTGATGCATTCACTTGGAGTCAACAG
CTATCGGTTCTCCATTTCTTGGGCGAGAATTTTACCTAAAGGGAGATTCG
GGAAAATCAATGAAGCGGGAATCAACTTCTACAACAAACTGATTGATGCC
CTCCTACTTAAAGGGATTAAGCCGCTTGTAACATTGACGCACGTTGATTT
TCCTCAAGAACTTGAGGACAGATATGGAAGTTGGCTGAGCCCCGAATGGC
AGGAGGATTTTGCATATTTTGCAGACATCTGCTTTAAGTCCTTCGGAGAC
CGGGTGAAGTATTGGGTCACCTTCAACGAGCCTGATTTCCAAGTCAAGTT
TGCGTACCGTACAGGAATATTCCCACCGTCTCGTTGCTCCTGGCCCTTTG
GGAATTGTACCTATGGTGATTCAGAGAAGGAGCCCTTTATAGCAGCGCAC
AATATTATCCTAGCACATATAGCAGCTGTTCATATTTACAGAACCAAATA
CCAGGAAACGCAAGGAGGTAGCATTGGAATTGTCTTGCATTGCTTTTGGT
TTGAATCCATCAGCAACTCTCTAGCTGACAAGCTAGCAGCTGAAAGAGCT
CAATCCTTCACTATGAAGTGGTTCCTAGACCCAATCATATTCGGAAGATA
TCCTCCAGAAATGCAAAACATTCTAGGATCTATTTTACCTGAATTTTCGA
CAACTGAGAAGGAGAAGCTGAACAAAGGATTGGATTTTATTGGAGTTAAC
CACTACTCGAGTTACTATGTCAAGGACTGCATGTTCTCTGTGTGTGAACC
AGGAACAGGAACTTCAAAGACGGAAGGATTTTGGGGGCAAAGTTCACAGA
AAAATGGCATTCCTATAGGGGAACTTACTGATCTGGATTGGCTGAACGTT
TACCCTCAAGGAATGGAGAAGATTGTAACCTATCTTAAAGAGACATACCA
TAACATACCCATGATCATTACAGAAAATGGATATGGAGAGGTGAGCAAAG
CAAATTCCACCACTGAAGAATTTTTACATGATGTCAAACGAGTTGAGTAC
TTGGCTGGATACTTGGATCAACTTTCAACAGCAATCAGGAAGGGAGCAGA
TGTGAGGGGTTACTTTGTCTGGTCTTTGCTGGACAACTTTGAATGGAATT
TTGGATATACGGTACGGTTTGGACTTCACCATGTTGACTTTAAGACCCTG
AAGAGAACTCCTAAATCGTCAGCAACTTGGTACAAAAATTTCATCTCGGA
GAATGGCCAAGTACAAGACCAGAAACCAGGACATGTTCAGAACCACCCTT
ACTACTATTAG
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protein sequence of Tc06v2_p017810.3

>Tc06v2_p017810.3 ID=Tc06v2_p017810.3|Name=Tc06v2_p017810.3|organism=Theobroma cacao|type=polypeptide|length=487bp
MDVSRMLCIGFFLLQVFLLPLSISSELLTLEQSLGNLSAFPPNFLFGTAS
SAYQEDIDLMHSLGVNSYRFSISWARILPKGRFGKINEAGINFYNKLIDA
LLLKGIKPLVTLTHVDFPQELEDRYGSWLSPEWQEDFAYFADICFKSFGD
RVKYWVTFNEPDFQVKFAYRTGIFPPSRCSWPFGNCTYGDSEKEPFIAAH
NIILAHIAAVHIYRTKYQETQGGSIGIVLHCFWFESISNSLADKLAAERA
QSFTMKWFLDPIIFGRYPPEMQNILGSILPEFSTTEKEKLNKGLDFIGVN
HYSSYYVKDCMFSVCEPGTGTSKTEGFWGQSSQKNGIPIGELTDLDWLNV
YPQGMEKIVTYLKETYHNIPMIITENGYGEVSKANSTTEEFLHDVKRVEY
LAGYLDQLSTAIRKGADVRGYFVWSLLDNFEWNFGYTVRFGLHHVDFKTL
KRTPKSSATWYKNFISENGQVQDQKPGHVQNHPYYY*
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