Tc06v2_t017190.1

Overview
NameTc06v2_t017190.1
Unique NameTc06v2_t017190.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length696
Properties
Property NameValue
NoteOxygen-evolving enhancer protein 3-2, chloroplastic
Model evidenceSupporting evidence includes similarity to: 21 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productoxygen-evolving enhancer protein 3-2, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597040
GenbankXM_007025852.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g017190Tc06v2_g017190Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p017190.1Tc06v2_p017190.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto347244auto347244Theobroma cacaoexon
exon-auto347245auto347245Theobroma cacaoexon
exon-auto347246auto347246Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto347247auto347247Theobroma cacaoCDS
CDS-auto347248auto347248Theobroma cacaoCDS
CDS-auto347249auto347249Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t017190.1 ID=Tc06v2_t017190.1|Name=Tc06v2_t017190.1|organism=Theobroma cacao|type=mRNA|length=696bp
ATGGCACAAGCAATGGCATCGATGGCTGGCTTACGTGGCTCCTCACAGGC
TGTGCTCGAAGGTAGCCTCCAACTCAGCGGGCAAACCCGCTTGAACATTG
CTGGCAACTCTAGAGTGGCTGTGGCTAGGCCCGGTTTCACGGTCAGGGCA
CAACAGGCACCAACCGAGCCTGAAACTGGACGCAGAGCCGTGCTGGGTCT
TGTTGCTGCTAGTTTGGCCACAGGCTCCTTTGTTCAAGCTGTGCTTGCCG
ATGCCAGAACCATCAAGGTTGGCCCACCTCCCCCACCCTCTGGTGGACTG
CCTGGAACTCTAAACTCTGATGAGCCAAGAGACCTTGACCTGCCATACAA
AAACAGGTTCTACATCCAACCACTTAGTCCGGCTCAGGCAGTTGCGAGGG
CAAAGGAGTCAGCCAAGGATATTGTTGGTGTCAAGAGTTTGATCGACAAA
AAGGCCTGGCCCTATGTCCAGAATGATCTCCGTCTCACGGCTTCGTATCT
CCGCTATGACCTTAACACTGTCATATCTGCAAAGTCCAAAGCTGAGAAGA
AGTCTCTCCAGGAACTCACTGGGAAGCTCTTCGACACCATCAGCAACCTG
GACCATGCAGCCAAGATCAAGAGCACCCCTGAAGCAGAGAAGTACTATGC
TCAGACTGTATCTACTCTGAACGATGTCCTCGCCAAGCTTGGCTAA
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protein sequence of Tc06v2_p017190.1

>Tc06v2_p017190.1 ID=Tc06v2_p017190.1|Name=Tc06v2_p017190.1|organism=Theobroma cacao|type=polypeptide|length=232bp
MAQAMASMAGLRGSSQAVLEGSLQLSGQTRLNIAGNSRVAVARPGFTVRA
QQAPTEPETGRRAVLGLVAASLATGSFVQAVLADARTIKVGPPPPPSGGL
PGTLNSDEPRDLDLPYKNRFYIQPLSPAQAVARAKESAKDIVGVKSLIDK
KAWPYVQNDLRLTASYLRYDLNTVISAKSKAEKKSLQELTGKLFDTISNL
DHAAKIKSTPEAEKYYAQTVSTLNDVLAKLG*
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