Tc06v2_t015900.1

Overview
NameTc06v2_t015900.1
Unique NameTc06v2_t015900.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1803
Properties
Property NameValue
NotePolyphenol oxidase, chloroplastic
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productpolyphenol oxidase, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596895
GenbankXM_018123225.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g015900Tc06v2_g015900Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p015900.1Tc06v2_p015900.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto344801auto344801Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto344802auto344802Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t015900.1 ID=Tc06v2_t015900.1|Name=Tc06v2_t015900.1|organism=Theobroma cacao|type=mRNA|length=1803bp
ATGGCTTCTCTCCTTCCACCATCCTCTACCGCCACCAATGGCGCTTCCCC
CATCTCTGTTACCACTTCTTTCCTTCCAAAAACATCCCAACTTTGCATAG
CTGGGAAGCGAAGGAGAAACTTCGTCTCCCGAGCAGTGTCATGCAAAGCC
ACAAATGGTGACCAAAACCCCAGTCCTAGCACTAAAAATGTTGAGGAATG
TTCTCTAAACAAGTTTGATAGGAGAGATGTTCTCGTTGGCCTTGGAGGTC
TGTATGGTGCAACCAGCCTTACTGGCCCGCTTGCTTTTGCGGCACCGGTT
AGTCCTCCGGACGTCACCAAATGTGGCAAAGCAGACCTGCCTGCTGGCGC
CAAGCCCGTCAATTGTTGCCCACCACCTTCGACAAAAATCCTGGATTTTA
AGCTCCGTCCTTCAAATTCCCCACCGCGCATTAGGCCTGCAGCTCATTTA
GTTGATAAAGAGTACTTAGCTAAATTTTCCAGGGCCCTTGAGCTCATGAA
AGCTCTTCCTGAAGATGATCCACGTAGCTTCACACAACAAGCAAACGTTC
ACTGTGCCTACTGTGATGGGGCGTATCACCAAATTGGGTTTCCAGATCTT
GATCTTCAAGTTCATAACTCATGGCTTTTCTTTCCATTCCATAGATATTA
TCTTTATTTCTTTGAAAAGATCTTGGGCAAGTTGATTGATGACCCAACTT
TTGCAATACCGTTTTGGAACTGGGATTCTCCTGCTGGCATGCAAATGCCT
GCCATTTATGCAAACCCTAACTCTCCTCTCTATGATGAAAATCGCAATCC
CAATCACCAACCACCTACACTCCTTGATCTTGATTTCAATGGCACCGAAG
AATCGTCATCAACTAGGGATCAGATATCAAGCAATCTTAACGTCATGTAC
AGGCAAATGGTGTCCAACGGTAAGACCGCCAAGCTTTTCTTAGGAAATGC
TTATCGTGCTGGCGATCAACCGGACCCTGGAGCTGGTTCACTTGAGAACA
TTCCTCACGGACCAATCCACATTTGGTGCGGTGACAACAGACAACCAAAC
TTGGAAGACATGGGGAATTTCTATTCCGCTGGAAGAGACCCCATTTTCTA
TGCTCATCACTCGAATGTGGACCGGATGTGGTCGGTTTGGAAGACATTGG
GAGGGAAGCGAACCGACTTCACTGACTCAGATTGGCTCAATTCCGGATTT
CTTTTCTATGACGAGAATGCAAATCTCGTTCGTGTTAAGGTCCGTGATTG
CCTTGACACTAGAAAGATGGGGTACGATTATCAAAAAGTTGACATTCCAT
GGTTACGCGCTAAACCAACTCCTAGAAGGATTGCCAGTAAAGTGGCAAGG
GCTCTTGGTGTTGCGCACGCAGCAGAGACAAAGAAAAAGGTTCTAAGTGA
CGTTCAATTCCCTCTGGTTCTAAACAACGTAGTGAGCCTTGAGGTTTCAA
GGCCAAAGAAATCAAGGAGCAAAGCAGAAAAAGAAGAGGAAGAGGAAGTG
TTGGTGATAGAGAACATCGAGTTTGACAGAGACCAGCTGGTGAAATTCGA
TGTGTACATTAACGACGAGGATGACACGACGATTGGACCCGACAACACAG
AGTTTGCAGGGAGCTTCATCAACGTGCCACACAAACATAGGCATGGAAAC
AAAATGACAACATGTTTGAGGTTGGGGTTGACAGATTTGTTGGAGGAACT
GGGTGCTGAGGATGATGATGGCGTGGTGGTGACCTTGGTGCCCAAATCTG
GCAAGGGTCTTGCTAAGATTGGTGGCGTCAAGATTGACTTCGCCCGAGAT
TGA
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protein sequence of Tc06v2_p015900.1

>Tc06v2_p015900.1 ID=Tc06v2_p015900.1|Name=Tc06v2_p015900.1|organism=Theobroma cacao|type=polypeptide|length=601bp
MASLLPPSSTATNGASPISVTTSFLPKTSQLCIAGKRRRNFVSRAVSCKA
TNGDQNPSPSTKNVEECSLNKFDRRDVLVGLGGLYGATSLTGPLAFAAPV
SPPDVTKCGKADLPAGAKPVNCCPPPSTKILDFKLRPSNSPPRIRPAAHL
VDKEYLAKFSRALELMKALPEDDPRSFTQQANVHCAYCDGAYHQIGFPDL
DLQVHNSWLFFPFHRYYLYFFEKILGKLIDDPTFAIPFWNWDSPAGMQMP
AIYANPNSPLYDENRNPNHQPPTLLDLDFNGTEESSSTRDQISSNLNVMY
RQMVSNGKTAKLFLGNAYRAGDQPDPGAGSLENIPHGPIHIWCGDNRQPN
LEDMGNFYSAGRDPIFYAHHSNVDRMWSVWKTLGGKRTDFTDSDWLNSGF
LFYDENANLVRVKVRDCLDTRKMGYDYQKVDIPWLRAKPTPRRIASKVAR
ALGVAHAAETKKKVLSDVQFPLVLNNVVSLEVSRPKKSRSKAEKEEEEEV
LVIENIEFDRDQLVKFDVYINDEDDTTIGPDNTEFAGSFINVPHKHRHGN
KMTTCLRLGLTDLLEELGAEDDDGVVVTLVPKSGKGLAKIGGVKIDFARD
*
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