Tc06v2_t012760.2

Overview
NameTc06v2_t012760.2
Unique NameTc06v2_t012760.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length702
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
ProductUDP-N-acetylglucosamine transferase subunit ALG14 homolog, transcript variant X4
NoteUDP-N-acetylglucosamine transferase subunit ALG14 isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596544
GenbankXM_018123743.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g012760Tc06v2_g012760Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p012760.2Tc06v2_p012760.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto338671auto338671Theobroma cacaoexon
exon-auto338672auto338672Theobroma cacaoexon
exon-auto338673auto338673Theobroma cacaoexon
exon-auto338674auto338674Theobroma cacaoexon
exon-auto338675auto338675Theobroma cacaoexon
exon-auto338676auto338676Theobroma cacaoexon
exon-auto338677auto338677Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto338678auto338678Theobroma cacaoCDS
CDS-auto338679auto338679Theobroma cacaoCDS
CDS-auto338680auto338680Theobroma cacaoCDS
CDS-auto338681auto338681Theobroma cacaoCDS
CDS-auto338682auto338682Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t012760.2 ID=Tc06v2_t012760.2|Name=Tc06v2_t012760.2|organism=Theobroma cacao|type=mRNA|length=702bp
ATGGAGAAAAACAGTAGCTGTTGCTTCTCCAATTTATCTTCCAATCTTCC
AATCACTTGTTTCGTCACCTTTATTGCAATTATCTTAGTCCGAATTCTCT
ACGTGATTTGGCGAACCTGCAAGCCACTGAGAAAAAGAACTTCGCAGCAG
CCTCTCAGCACTCTCGTTGTTTTGGGTTCAGGAGGACACACGGCAGAGAT
GATTGATCTCTTGTTAGTTTTGCAAAAGAACAAGTTTACGCCGAGGTTTT
ATATAGCCGCTGCTACTGATAATATGAGCCTGCAGAAAGCTCGTGTTTTG
GAGAATTCTTTGGCTGATTCGAGTGGGGTCAAGGAAATCTCTGCTGAGTT
CATGCAGATCTATAGAAGCAGGGAAGTTGGTCAATCATATGTAACCTCTG
TTTGGACAACTTTAGTAGCCCTGGCTCATGCATTGTGGCTGATGATTAAA
ATCAGACCTCAAGTGGTTCTTTGCAATGGCCCTGGTACTTGTATTCCTCT
ATGTGTAATTGCATTCATTTTCAAGGTGGTTGGAATTAGATGGTCATCCA
TCTTTTATGTTGAGAGCATTGCAAGAGTAAAGAGGCTCTCTTTAAGTGGT
TTGTTGCTTTACAAGTTACGGATTGCAGATCAGTTCTTTGTGCAATGGCC
ACAACTGCAGAGAAAATACCCTCGAGCTCATTATGTTGGTTGCCTGATGT
AG
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protein sequence of Tc06v2_p012760.2

>Tc06v2_p012760.2 ID=Tc06v2_p012760.2|Name=Tc06v2_p012760.2|organism=Theobroma cacao|type=polypeptide|length=234bp
MEKNSSCCFSNLSSNLPITCFVTFIAIILVRILYVIWRTCKPLRKRTSQQ
PLSTLVVLGSGGHTAEMIDLLLVLQKNKFTPRFYIAAATDNMSLQKARVL
ENSLADSSGVKEISAEFMQIYRSREVGQSYVTSVWTTLVALAHALWLMIK
IRPQVVLCNGPGTCIPLCVIAFIFKVVGIRWSSIFYVESIARVKRLSLSG
LLLYKLRIADQFFVQWPQLQRKYPRAHYVGCLM*
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