Tc06v2_t011410.2

Overview
NameTc06v2_t011410.2
Unique NameTc06v2_t011410.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length528
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productpyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2, transcript variant X1
NoteUncharacterized protein isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596392
GenbankXM_007024825.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g011410Tc06v2_g011410Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p011410.2Tc06v2_p011410.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto336050auto336050Theobroma cacaoexon
exon-auto336051auto336051Theobroma cacaoexon
exon-auto336052auto336052Theobroma cacaoexon
exon-auto336053auto336053Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto336054auto336054Theobroma cacaoCDS
CDS-auto336055auto336055Theobroma cacaoCDS
CDS-auto336056auto336056Theobroma cacaoCDS
CDS-auto336057auto336057Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t011410.2 ID=Tc06v2_t011410.2|Name=Tc06v2_t011410.2|organism=Theobroma cacao|type=mRNA|length=528bp
ATGGATTTCTTCGAAATGCTTGGGTCTTCAACGAAGCTGGCCTATGACAA
TTGTCTATCCTTGTGGCAGAAAACAGAATCAGAAGACATAAATAATATGA
TGGTTGACATTTATCAAGAAGCAGGACCCACCCTGTTAGAGGAACCGGAA
TCAAGCATAGTGTTCATGGATCTGCACAGACAGGATGAAGATCACATTAA
AAGGTTAAAGGAATTTCAGGCTTACTATGACATGGTGAAGAGGATGGTTA
AACCTGGTTGTTCACAAGAAGTGTTAAAAGTGGCATTGAATTCCATGTCC
TCGCTAAAGAAGAATCTGCCTGGATGTCCATCAGATGAAATTGCATGTTG
CAGATTTGCATGCCTGTATCTCTGTATTAAACCTTCTGTTCTACTTTTGT
ATAGTCACATAGTGGTCCAGATCAATGTACATTTAAATTTATTGAAGAAG
CAAGATATGGGAATGTTCTATTCTGTAACTTGTCAGCACACAACATTATG
CATCGCAAGCTGTCACACTTGTAGTTAA
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protein sequence of Tc06v2_p011410.2

>Tc06v2_p011410.2 ID=Tc06v2_p011410.2|Name=Tc06v2_p011410.2|organism=Theobroma cacao|type=polypeptide|length=176bp
MDFFEMLGSSTKLAYDNCLSLWQKTESEDINNMMVDIYQEAGPTLLEEPE
SSIVFMDLHRQDEDHIKRLKEFQAYYDMVKRMVKPGCSQEVLKVALNSMS
SLKKNLPGCPSDEIACCRFACLYLCIKPSVLLLYSHIVVQINVHLNLLKK
QDMGMFYSVTCQHTTLCIASCHTCS*
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