Tc06v2_t011410.1

Overview
NameTc06v2_t011410.1
Unique NameTc06v2_t011410.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length498
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Productpyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2, transcript variant X2
NoteUncharacterized protein isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596392
GenbankXM_007024826.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g011410Tc06v2_g011410Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p011410.1Tc06v2_p011410.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto336040auto336040Theobroma cacaoexon
exon-auto336041auto336041Theobroma cacaoexon
exon-auto336042auto336042Theobroma cacaoexon
exon-auto336043auto336043Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto336044auto336044Theobroma cacaoCDS
CDS-auto336045auto336045Theobroma cacaoCDS
CDS-auto336046auto336046Theobroma cacaoCDS
CDS-auto336047auto336047Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t011410.1 ID=Tc06v2_t011410.1|Name=Tc06v2_t011410.1|organism=Theobroma cacao|type=mRNA|length=498bp
ATGGATTTCTTCGAAATGCTTGGGTCTTCAACGAAGCTGAAAACAGAATC
AGAAGACATAAATAATATGATGGTTGACATTTATCAAGAAGCAGGACCCA
CCCTGTTAGAGGAACCGGAATCAAGCATAGTGTTCATGGATCTGCACAGA
CAGGATGAAGATCACATTAAAAGGTTAAAGGAATTTCAGGCTTACTATGA
CATGGTGAAGAGGATGGTTAAACCTGGTTGTTCACAAGAAGTGTTAAAAG
TGGCATTGAATTCCATGTCCTCGCTAAAGAAGAATCTGCCTGGATGTCCA
TCAGATGAAATTGCATGTTGCAGATTTGCATGCCTGTATCTCTGTATTAA
ACCTTCTGTTCTACTTTTGTATAGTCACATAGTGGTCCAGATCAATGTAC
ATTTAAATTTATTGAAGAAGCAAGATATGGGAATGTTCTATTCTGTAACT
TGTCAGCACACAACATTATGCATCGCAAGCTGTCACACTTGTAGTTAA
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protein sequence of Tc06v2_p011410.1

>Tc06v2_p011410.1 ID=Tc06v2_p011410.1|Name=Tc06v2_p011410.1|organism=Theobroma cacao|type=polypeptide|length=166bp
MDFFEMLGSSTKLKTESEDINNMMVDIYQEAGPTLLEEPESSIVFMDLHR
QDEDHIKRLKEFQAYYDMVKRMVKPGCSQEVLKVALNSMSSLKKNLPGCP
SDEIACCRFACLYLCIKPSVLLLYSHIVVQINVHLNLLKKQDMGMFYSVT
CQHTTLCIASCHTCS*
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