Tc06v2_t011150.1

Overview
NameTc06v2_t011150.1
Unique NameTc06v2_t011150.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length684
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 24 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productphotosystem I reaction center subunit III, chloroplastic
NotePhotosystem I reaction center subunit III, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596364
GenbankXM_007024787.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g011150Tc06v2_g011150Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p011150.1Tc06v2_p011150.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto335429auto335429Theobroma cacaoexon
exon-auto335430auto335430Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto335431auto335431Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t011150.1 ID=Tc06v2_t011150.1|Name=Tc06v2_t011150.1|organism=Theobroma cacao|type=mRNA|length=684bp
ATGTCTCTTACAATCCCAACTAATCTCTCAAAACCGCTTTTGAAGCCAAA
GCTAAACTCCCAGGTTACCCCCAAAGTTTCAAGATCGTTGGTGGTGTGCT
CAAGCACTCCATCCTCAGACAAGAGTTCGACATCACCCTCGGCTTCGCCG
CTCCAAGCCTTCTCAGCTGCTCTTGCTCTTTCTTCCATTCTTCTTTCAGC
TCCACAGCCTGCTGTAGCTGACATTTCAGGGCTCACCCCATGCAAGGAGT
CCAAGCAGTTCGCCAAACGTGAAAAGCAGCAGATCAAGAAGCTCGAGTCA
TCGTTGAATCTTTACGCCCCTGACAGCGCTCCAGCTCTGGCTATCAAAGC
AACCATCGAGAAAACCAAGAGAAGGTTCGACAACTATGGGAAATACGGGC
TGCTTTGTGGCTCTGATGGGTTGCCTCATTTGATAGTGAACGGTGACCAG
AGGCACTGGGGTGAGTTCATCACACCAGGCCTTTTGTTCTTGTACATCGC
TGGATGGATCGGGTGGGTTGGAAGAAGCTACCTCATTGCTATAAGGGATG
ACAAGAAGCCAGCCATGAAGGAGATCATCATCGATGTGCCTTTGGCTAGC
AGTCTGCTCTTTAGAGGCTTCATCTGGCCTGTCGCAGCCTACAGAGACCT
TGTCAATGGTGACCTGATTGCCAAGGACGTGTAA
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protein sequence of Tc06v2_p011150.1

>Tc06v2_p011150.1 ID=Tc06v2_p011150.1|Name=Tc06v2_p011150.1|organism=Theobroma cacao|type=polypeptide|length=228bp
MSLTIPTNLSKPLLKPKLNSQVTPKVSRSLVVCSSTPSSDKSSTSPSASP
LQAFSAALALSSILLSAPQPAVADISGLTPCKESKQFAKREKQQIKKLES
SLNLYAPDSAPALAIKATIEKTKRRFDNYGKYGLLCGSDGLPHLIVNGDQ
RHWGEFITPGLLFLYIAGWIGWVGRSYLIAIRDDKKPAMKEIIIDVPLAS
SLLFRGFIWPVAAYRDLVNGDLIAKDV*
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