Tc06v2_t010670.1

Overview
NameTc06v2_t010670.1
Unique NameTc06v2_t010670.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1749
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 mRNA, 10 ESTs, 94 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productpectinesterase
NotePectinesterase 3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596314
GenbankXM_018123592.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g010670Tc06v2_g010670Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p010670.1Tc06v2_p010670.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto333915auto333915Theobroma cacaoexon
exon-auto333916auto333916Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto333917auto333917Theobroma cacaoCDS
CDS-auto333918auto333918Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t010670.1 ID=Tc06v2_t010670.1|Name=Tc06v2_t010670.1|organism=Theobroma cacao|type=mRNA|length=1749bp
ATGACCCGAATCAAAGAACTCCTAACCAAAATTTCTGATTCTGGAAAGCA
CATTTCCTCCACAAAGAAACACAAGAAAGTTATCTTGGCAGTGTTTGGAT
CTTTAGTGATTGTTGCTGCTATAATTGGCATTGTCGCCGGGGTGAATTCA
CGCAATAACTCCGATGAAACCGATACATCCCACCATGCCATAGTAAAATC
AGCTTGTAGCATCACACGCTACCCTGATTTATGCTTCTCAGAAGTAGCTG
CAGCTCCTGCTGCTACCTCCAAAAAGGTTAAAAGCAAAAAAGATGTCATC
GAATTGTCCCTTAACATCACAACCACTGCGGTTGAACACAACTACTTCAA
AATTAAGAAGCTGTTGGCAAAGAAGGGCCTCACGGAACGTGAAAAGACAG
CTCTCCATGATTGTTTGGAGACTATAGATGAGACCCTCGACGAGCTTCAC
GAGGCTGTTGAGGACCTGCATGAGTATCCTAACAAGAAATCTTTGACTCA
GCACGCGGATGACCTCAAGACCCTGATGAGCGCTGCCATGACCAACCAAG
AAACTTGCTTGGATGGTTTCTCTCATGACGCTGCCGACAAGAAAATCCGT
AAAGTCCTGATCGATGGCGAGAAGTATGTTGAAAGGATGTGCAGCAATGC
ACTTGCCATGATCAAGAACATGACGGACACTGATATTGCAAACGAGATGC
TCAAGACATCATCAAACAGGAAGCTAAAGGAGCAAGAAAATGGCATTGCC
TGGCCAGAGTGGTTGTCTGCCGGCGACAGGCGTCTGCTTCAATCGTCTTC
GGTGACCCCTGACGTGGTTGTGGCGGCAGATGGTAGCGGGAACTACAAGA
CAGTGTCGGAAGCTGTGGCCAAAGCACCACAGCGTAGCAGCAAAAGGTAT
GTGATTAAAATCAAAGCAGGTGTCTACAGAGAAAACGTGGAAGTCCCCAA
GAAGAAGACCAACATAATGTTCCTGGGAGATGGAAGAACTGAAACGATCA
TCACCGGCAGCAGGAATGTGGTTGATGGCAGCACTACTTTCCACTCTGCT
ACAGTTGCTGTGGTTGGTGAACGGTTCCTTGCACGGAGCATAACCTTCCA
AAACACAGCAGGTCCCTCCAAGCACCAAGCCGTTGCCCTCCGTGTTGGCG
CTGATCTCTCAGCATTCTACGAATGTGACATGCTAGCATATCAAGACACT
CTCTATGCTCACTCCAATCGACAATTTTATGTGAACTGCATCATAGCAGG
AACTGTTGATTTTATCTTTGGCAATGCTGCAGCTGTGTTCCAAAACTGTG
ATATTCATGCTCGAAGACCCAATTCAGGACAGAAAAACATGGTGACTGCC
CAAGGCAGGACTGACCCCAACCAAAACACAGGCATTGTTATCCAGAAATG
TAGGATTGGTGCCACCTCTGATTTGCAGTCTGTTACGAGCAACTTCCCAA
CATATCTTGGCAGGCCCTGGAAGGAATATTCAAGGACTGTTGTAATGCAA
TCAGTTATTAGTGATGTGATTCACCCTGCTGGGTGGCACGAGTGGAGTGA
GAGTTTTGCCTTGAGAACATTGTTTTATGGTGAGTACCAGAACACCGGGG
CAGGTGCTGGAACTTCTGGGAGGGTGAAATGGGAAGGGTACAAGGTAATC
ACTAGTGCAAGTGAAGCTCAGGCGTATAGTCCTGGCAGGTTCATTGCTGG
TGGAAGTTGGCTAAGCTCTACAGGCTTTCCTTTCTCTCTTGGGTTATAA
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protein sequence of Tc06v2_p010670.1

>Tc06v2_p010670.1 ID=Tc06v2_p010670.1|Name=Tc06v2_p010670.1|organism=Theobroma cacao|type=polypeptide|length=583bp
MTRIKELLTKISDSGKHISSTKKHKKVILAVFGSLVIVAAIIGIVAGVNS
RNNSDETDTSHHAIVKSACSITRYPDLCFSEVAAAPAATSKKVKSKKDVI
ELSLNITTTAVEHNYFKIKKLLAKKGLTEREKTALHDCLETIDETLDELH
EAVEDLHEYPNKKSLTQHADDLKTLMSAAMTNQETCLDGFSHDAADKKIR
KVLIDGEKYVERMCSNALAMIKNMTDTDIANEMLKTSSNRKLKEQENGIA
WPEWLSAGDRRLLQSSSVTPDVVVAADGSGNYKTVSEAVAKAPQRSSKRY
VIKIKAGVYRENVEVPKKKTNIMFLGDGRTETIITGSRNVVDGSTTFHSA
TVAVVGERFLARSITFQNTAGPSKHQAVALRVGADLSAFYECDMLAYQDT
LYAHSNRQFYVNCIIAGTVDFIFGNAAAVFQNCDIHARRPNSGQKNMVTA
QGRTDPNQNTGIVIQKCRIGATSDLQSVTSNFPTYLGRPWKEYSRTVVMQ
SVISDVIHPAGWHEWSESFALRTLFYGEYQNTGAGAGTSGRVKWEGYKVI
TSASEAQAYSPGRFIAGGSWLSSTGFPFSLGL*
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