Tc06v2_t010180.2

Overview
NameTc06v2_t010180.2
Unique NameTc06v2_t010180.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2670
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productprobable disease resistance protein At1g58390, transcript variant X1
NotePutative Probable disease resistance protein At1g58390
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596258
GenbankXM_018123744.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g010180Tc06v2_g010180Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p010180.2Tc06v2_p010180.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto332667auto332667Theobroma cacaoexon
exon-auto332668auto332668Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto332669auto332669Theobroma cacaoCDS
CDS-auto332670auto332670Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t010180.2 ID=Tc06v2_t010180.2|Name=Tc06v2_t010180.2|organism=Theobroma cacao|type=mRNA|length=2670bp
ATGGATGCTGAAGTGGTAGTTTCTCTTCTCTCACAGAAACTGCAAAATCT
TCTCCATGATGAAGCGATAGCCCTGACCCCAAAGGTGAAAGATCAAGTTC
AGAGAACCACCCACCAGCTCAACTTGATCAGGCAGTTGCTGAAAGAAGCA
GATCAGAAGAATCGAGCATTAACTGTTGAAATTAACAGCGGTAAGTGTAC
AACTCGTCTCTTGCGAGCTCTCTACTCTATGGATGATGCCATTGACAACT
TTCTAGTCAGGAAAGCATTGCAGAGTCGGAAGCCTTTCACTTCTTTCTGT
AACCGAGTTGTCTTCAACAAAGAGATGAAACAATTCATTTCCAAGACTGG
AGACTTAATCAAAGATAAGCAACCATTGGATATTCAAGATGTTACTGATA
ACAATATCCCAGGCCCGAGCCAACACCAACGTTGGGCAAGAATATCTGAT
TTTTGTTTCGACGGTGAAAGTCACGTGGTTGGCCTTGAGGAACAAGTAAA
GAATTTGGTTGCTCTTGTAGTCCAGGGGGCAGAGCAAGGGAACCAACCAG
CAATTGTTTCGATGGTTGGCGAGGGAGGATCAGGCAAAACAGCCATAGCA
AGAATCGTATACAACAGAGTGGACATCAAGCGGCATTTCACTAGCCGTGC
ATGGGTTCATGTTACGAAAGAGTTCAAAGTGAGAGATTTATTGGTTGACA
TGATTACCCAGCTTGATGAAAAGATTGCGAAAGAGCCATTACTGGAGGAC
GAATTAAAGTGGAGGCTCCCTAAACTTCTAGGACAAGGAAGATATCTAAT
TGTTGTTGACGATGTCGATGCTCCTGAATTTTGGGAAGCAATCAAGGAGG
TCTTTCCACCCTTTTCCCACGGTGGTGTGGTGATTGTAACTACCCGAAAG
GCGGGCCTGGCAGTGCCAGCTGGTTCAACTCTACAGGTACGTCCATTGAA
TGATGAAGAAAGCTGGGCTTTGTTCTTAAAGAAGCTAGACATAACTGAAG
ATAGATTACATAATTCTCAGTTAATGAAATTCAAGGGGCAAATCTTGAAA
TTATGTGGTGGTTTACCTCTAGCAATTGTCTTAATGGGTGGTTTGTTGTC
TGCTAAAGAATTAACAGATAGCGAATGGTCAAGAGTGATCGAGCATGTGA
ATGCTATAGAAGGTATCTTGGCCTTAAGCTATCATGAATTGCCTTCTTAC
TTGAAGCCCTGCTTTCTTTACATGGGACTCTTTCCGAAAGCGATTGAGAT
CCCCATAAGGAGGTTGATTCATCTGTGGGTAGCTGAGGGTTTTGTCACAT
CCTTGTCTGACGGTGATATGGTTGAGGAGGATCTGGCAGAAATGTATTTT
GAGGAACTAGTTTGTAGAAAAATGATTGAAGTGGTAAGATGGAGGTTAGA
TGGGAGCCCCAAAACATGTCGTTTGCCAAGCCTTGTCCATGATGTCTTCT
CCTTAAAAGCAAGGGATATTGGATTTCTTCAGATCCACAATACGTCATTT
TCAGCTAACACATCACAATTACCAGTCCGGAGACTTGCAACATATTCAAA
CATCCCTTTTTCAAAACTTCACGAAAGCCATTTACGTTCTTATGTATCTT
TTAACACTTTAAAAGGAGGTATCCCTGCTGGAAATTCAAGCATGTTTTTA
GACAAGATTATGAGTAAGGGAAACCTCGGAGTGTTTAGGGTGCTTGATCT
TGAGGGTGTCTACAAACCTCAGCTTCCCAAGGCAATGGGCACTCTCTTGA
ACTTAAGGTACCTAGGCTTAAGATCCACTGTTATTAATTCACTTCCAGTC
TCTATTGGCGTTTTGCAATGCCTGGAAACTTTGGATGTGAAGCACACCAA
CATAACCACTTTGCCTGATTCTTTTTGGAAGATTAGGGGCCTGCGCCATC
TCTATCTGAATGGAATTTGTCTTGATTCTTTGGACGTGCTCTCAGCGGAG
ACTTTGAATAAGCTTCAAAGCTTATGTGGGTTGTCTATTAGCACCGAATC
TTTAGTTGCAGAGACCTTGAGCAAGTTTAAATGCCTCAGAAAGTTGCAGT
TGACATTCTATATCCCAAGAAGTATAAAAATTGATTGGACATCTCAACTG
AACAAACTTCACTCTCTAAGGATAAGATCAATGAGAAAGTCTGGTGAGAG
TGCACCCATCAAGTTAACGAGCTTCAAGGAGCAGCACAACCTGGTCAACT
TATATTTGTTTGGATCGTTACTAAGACCATTCAAATCCACAATATTTCCT
CCAAACCTGAAAAGCCTCACTTTATCAAAGACAGTACTGGGCAAAGATCC
AATGCTAGAGCTAGGAAAGCTGCCTCAGTTAAATATACTAAGGCTTTTCA
GTTTTTCCTACATAGGGGAAGAAATGACTTGTGTCTCTGGAGCATTTCCT
CAACTCCATGTCTTGAAACTGTGGCAACTGGGCAATTTTAGTAATTGGCT
TGTGGAAGAAGGAGCCTTGCCTAGTCTCAGAGAATTAGAAATTAGGGACT
GTAGAAGTCTCAAAACGCTGGATGCATTATACCAGCTGACCAGCTTGAGG
GAATTGATACTTACTAATATGCCACCAGATTTTGCAGACTATGTTAGAGG
CATTAATAGCACCGGCAGCGCTGTATTTATCAAAGAAAATCACTGGGAAC
CTTCTCCTCCGATGTTGTAG
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protein sequence of Tc06v2_p010180.2

>Tc06v2_p010180.2 ID=Tc06v2_p010180.2|Name=Tc06v2_p010180.2|organism=Theobroma cacao|type=polypeptide|length=890bp
MDAEVVVSLLSQKLQNLLHDEAIALTPKVKDQVQRTTHQLNLIRQLLKEA
DQKNRALTVEINSGKCTTRLLRALYSMDDAIDNFLVRKALQSRKPFTSFC
NRVVFNKEMKQFISKTGDLIKDKQPLDIQDVTDNNIPGPSQHQRWARISD
FCFDGESHVVGLEEQVKNLVALVVQGAEQGNQPAIVSMVGEGGSGKTAIA
RIVYNRVDIKRHFTSRAWVHVTKEFKVRDLLVDMITQLDEKIAKEPLLED
ELKWRLPKLLGQGRYLIVVDDVDAPEFWEAIKEVFPPFSHGGVVIVTTRK
AGLAVPAGSTLQVRPLNDEESWALFLKKLDITEDRLHNSQLMKFKGQILK
LCGGLPLAIVLMGGLLSAKELTDSEWSRVIEHVNAIEGILALSYHELPSY
LKPCFLYMGLFPKAIEIPIRRLIHLWVAEGFVTSLSDGDMVEEDLAEMYF
EELVCRKMIEVVRWRLDGSPKTCRLPSLVHDVFSLKARDIGFLQIHNTSF
SANTSQLPVRRLATYSNIPFSKLHESHLRSYVSFNTLKGGIPAGNSSMFL
DKIMSKGNLGVFRVLDLEGVYKPQLPKAMGTLLNLRYLGLRSTVINSLPV
SIGVLQCLETLDVKHTNITTLPDSFWKIRGLRHLYLNGICLDSLDVLSAE
TLNKLQSLCGLSISTESLVAETLSKFKCLRKLQLTFYIPRSIKIDWTSQL
NKLHSLRIRSMRKSGESAPIKLTSFKEQHNLVNLYLFGSLLRPFKSTIFP
PNLKSLTLSKTVLGKDPMLELGKLPQLNILRLFSFSYIGEEMTCVSGAFP
QLHVLKLWQLGNFSNWLVEEGALPSLRELEIRDCRSLKTLDALYQLTSLR
ELILTNMPPDFADYVRGINSTGSAVFIKENHWEPSPPML*
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