Tc06v2_t009780.2

Overview
NameTc06v2_t009780.2
Unique NameTc06v2_t009780.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length285
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productubiquitin-like protein ATG12, transcript variant X1
NoteUbiquitin-like protein ATG12
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596213
GenbankXM_007024551.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g009780Tc06v2_g009780Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p009780.2Tc06v2_p009780.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto332018auto332018Theobroma cacaoexon
exon-auto332019auto332019Theobroma cacaoexon
exon-auto332020auto332020Theobroma cacaoexon
exon-auto332021auto332021Theobroma cacaoexon
exon-auto332022auto332022Theobroma cacaoexon
exon-auto332023auto332023Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto332024auto332024Theobroma cacaoCDS
CDS-auto332025auto332025Theobroma cacaoCDS
CDS-auto332026auto332026Theobroma cacaoCDS
CDS-auto332027auto332027Theobroma cacaoCDS
CDS-auto332028auto332028Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t009780.2 ID=Tc06v2_t009780.2|Name=Tc06v2_t009780.2|organism=Theobroma cacao|type=mRNA|length=285bp
ATGGCAGCCGAGTCACCTACTTCTGTTCGGAAAGTTGTTGTTCATTTGAG
AGCAACTGGGGATGCCCCAATACTAAAGCAAGCCAAATTCAAGATACCAG
GAACTGACAAATTTGCTAAAGTAATTGATTTTTTACGCCGGCAACTGCAC
CGGGATACACTGTTTGTGTATGTCAACAGTGCCTTCTCACCAAACCCAGA
TGAATTAGTGATTGACCTGTATAATAATTTTGGTTTTGATGGTAAACTGG
TGGTTAATTATGCCTGTTCCATGGCATGGGGCTAA
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protein sequence of Tc06v2_p009780.2

>Tc06v2_p009780.2 ID=Tc06v2_p009780.2|Name=Tc06v2_p009780.2|organism=Theobroma cacao|type=polypeptide|length=95bp
MAAESPTSVRKVVVHLRATGDAPILKQAKFKIPGTDKFAKVIDFLRRQLH
RDTLFVYVNSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG*
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