|
|
Properties
| Property Name | Value |
|---|
| Model evidence | Supporting evidence includes similarity to: 4 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns |
| Product | nuclear poly(A) polymerase 4, transcript variant X2 |
| Note | Nuclear poly(A) polymerase 4 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc06v2_t008260.1 ID=Tc06v2_t008260.1|Name=Tc06v2_t008260.1|organism=Theobroma cacao|type=mRNA|length=2094bp
ATGGTGAGTTCAGAGGGATTGAGTGGTTCGACACCGCCGGTGGCAGCGCC
AGTGAAGCAGTACGGTGTAACAAAGCCGATATCAATGGCAGGTCCCTCCG
AAGCCGATATACAAAGAAGTCGTGAATTGGAAAAGTTTTTGGTGGAAGCT
GGGCTTTATGAGAGCGAAGAAGAAACTGCAAAGAGAGAAGAAGTTCTTGG
TCGAATTCAAGAGATTGTAACAGATTGGGTGAAGCAACTTACTCGGTTGA
GGGGTTACACAGGTCAGATGGTTGAAGATGCAAAAGCAGTCATTTTAACT
TTTGGTTCTTATCGACTTGGGGTTCATGGACCTGGCTCTGACGTAGACAC
TTTATGTGTGGGACCATCCTATGTGAACCGAGAGGAAGATTTCTTCTTTG
TATTGCACAACATCCTGGCAGAAAGGGAAGAAGTTACTGAGCTACAACCT
GTTCCAGATGCTCATGTCCCTGTAATGAAATTTAAGTTTGATGGAATATC
AATTGACCTTCTTTATGCAAGCATCTCTCTTTTGGTTGTGCCTCAAGATC
TTGACATCTCTGATGTGTCGGTATTGTACAATGTTGATGAGCCTACCGTT
CGAAGTCTTAATGGCTGCCGGGTTGCAGATCAAATTCTGAAACTAGTTCC
AAATGCTGAGCATTTTCGCACAACACTCCGATGTCTGAAGTTCTGGGCTA
AAAGGCGTGGTGTTTATTCTAATGTGACTGGATTTCTTGGTGGTGTTAAT
TGGGCTCTTCTTGTAGCTCGAGTTTGCCAGCTTTATCCCAATGCAGTTCC
TATTATGCTTGTTTCACGATTTTTTAGGGTCTTTACTCAGTGGCGTTGGC
CAAACCCAGTTACGCTTTGTGCAATTGAAGAAGATGAACTTGGATTTTCT
GTATGGGATCCTCGTAAAAATCCTCGTGATAGGACTCATCTTATGCCAAT
AATTACACCTGCCTATCCATGCATGAATTCTAGCTATAATGTATCTGCAA
GCACCCTTCGAGTCATGACGGAGCAGTTAAAATATGGTAACAACATTTGT
GAGGAGATTCAGCTGAATAGAGTAAAGTGGAGTGCTCTGTTTGAGCCTTA
TTTGTTCTTCGAAAGCTACAAAAACTATCTTCAGGTTGATGTTGTTGCAG
CTGATGCCAATGACTTGCGTGCTTGGAAAGGCTGGGTGGAATCCCGGCTA
AGGCAGCTTACTTTGATGATTGAGCGAGTCACTTATGGAAAGTTGCAGTG
CCATCCTTATCCTCATGAGTATGTAGATGCATCTAAGCCATGTGCCTGTT
GTGCCTTCTTTATGGGTTTACAAAGGAAACAGGGGGAAATAGTTCAGGAA
GGTCAGCAATTTGATATACGAGGATCAGTTGATGAATTCCGGCATTCGGT
AAGCATGTACATGTATTGGAAACCTGGGATGGAAATCCATGTATCGCATA
TTCGTAGAAAGCAGCTTCCGGCTTATGTTTTGCCAGATGGCTACAAACAT
CCTTGGAATCCACGGGTTACTCCCCACCATCAGTCTGATAAACTGTCCCA
TAACAATCATATTGCATGTACTGAATCTGGTGGGAAATGCCTTAAAAGGA
AAAAGGATCCTGAAGGAGAAAATAATGAGCATAGTAAGCCGGAGAAACGG
CTGAATCTTGATGGTAGTGAATCTGTTTCTCCTGAGATTATTAGTTGTGA
GCTTAGCAGAATGTCTTCAGGTTGTTCTACATCTGATTTAGATGAAATGA
ATGGAGTTGCTGAAGGGAATGCATCATCTAATTCCAGCACTATCAGCTCT
TGCTCAAATGAGGATATTGGGAATGAATCCAGTGAAGGGAGCAATGGAGG
TGATAATGGGAGCATAGAAGGGATTACTATCCCAGCATCTTCTCAGAGTG
ATTCATGTGATGCAGATTCAAAATCTTCTTTGGAGGATGAACATGCTGAT
CACAACAGAGTATTTGAAGATGGATTACAGAAAGAGTTAGAGCCTAATGC
CGCTGTTGGTGTGGTTCTCAAGTCCATGAATGAAGCTGACTCAGAAACTG
TGCAGAATACCGTGATAAGGTTGAATTTGACGTCAACAGCATGA back to topprotein sequence of Tc06v2_p008260.1 >Tc06v2_p008260.1 ID=Tc06v2_p008260.1|Name=Tc06v2_p008260.1|organism=Theobroma cacao|type=polypeptide|length=698bp
MVSSEGLSGSTPPVAAPVKQYGVTKPISMAGPSEADIQRSRELEKFLVEA
GLYESEEETAKREEVLGRIQEIVTDWVKQLTRLRGYTGQMVEDAKAVILT
FGSYRLGVHGPGSDVDTLCVGPSYVNREEDFFFVLHNILAEREEVTELQP
VPDAHVPVMKFKFDGISIDLLYASISLLVVPQDLDISDVSVLYNVDEPTV
RSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVN
WALLVARVCQLYPNAVPIMLVSRFFRVFTQWRWPNPVTLCAIEEDELGFS
VWDPRKNPRDRTHLMPIITPAYPCMNSSYNVSASTLRVMTEQLKYGNNIC
EEIQLNRVKWSALFEPYLFFESYKNYLQVDVVAADANDLRAWKGWVESRL
RQLTLMIERVTYGKLQCHPYPHEYVDASKPCACCAFFMGLQRKQGEIVQE
GQQFDIRGSVDEFRHSVSMYMYWKPGMEIHVSHIRRKQLPAYVLPDGYKH
PWNPRVTPHHQSDKLSHNNHIACTESGGKCLKRKKDPEGENNEHSKPEKR
LNLDGSESVSPEIISCELSRMSSGCSTSDLDEMNGVAEGNASSNSSTISS
CSNEDIGNESSEGSNGGDNGSIEGITIPASSQSDSCDADSKSSLEDEHAD
HNRVFEDGLQKELEPNAAVGVVLKSMNEADSETVQNTVIRLNLTSTA* back to top
|