Tc06v2_t008250.1

Overview
NameTc06v2_t008250.1
Unique NameTc06v2_t008250.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1497
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Producthexokinase-2
NoteHexokinase-1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596028
GenbankXM_018123410.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g008250Tc06v2_g008250Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p008250.1Tc06v2_p008250.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto328259auto328259Theobroma cacaoexon
exon-auto328260auto328260Theobroma cacaoexon
exon-auto328261auto328261Theobroma cacaoexon
exon-auto328262auto328262Theobroma cacaoexon
exon-auto328263auto328263Theobroma cacaoexon
exon-auto328264auto328264Theobroma cacaoexon
exon-auto328265auto328265Theobroma cacaoexon
exon-auto328266auto328266Theobroma cacaoexon
exon-auto328267auto328267Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto328268auto328268Theobroma cacaoCDS
CDS-auto328269auto328269Theobroma cacaoCDS
CDS-auto328270auto328270Theobroma cacaoCDS
CDS-auto328271auto328271Theobroma cacaoCDS
CDS-auto328272auto328272Theobroma cacaoCDS
CDS-auto328273auto328273Theobroma cacaoCDS
CDS-auto328274auto328274Theobroma cacaoCDS
CDS-auto328275auto328275Theobroma cacaoCDS
CDS-auto328276auto328276Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t008250.1 ID=Tc06v2_t008250.1|Name=Tc06v2_t008250.1|organism=Theobroma cacao|type=mRNA|length=1497bp
ATGGGCAAGGTGGCCGTTGGGGTGGCGGTGGTGTGTGGGGTCGCGGTGGC
AGCGGCAGCAGCGGTGGTGGTTCATCGAAAAATGAAGAAGTCAGGGAGGT
GGGTAAAAGCAATGGAGATAGTTAAAGAGTTTGAAGAAAAGTGTGGGACC
CCGATTTGGAAGCTGAGACAAGTGGCTGATGCCATGACTGTAGAGATGCA
TGCTGGCCTTGCCTCTGAAGGTGGCAGCAAACTTAAGATGCTCATCAGCT
ATGTTGACAATTTGCCTACCGGGAATGAGAAGGGATTATTTTATGCATTG
GACCTTGGTGGAACTAACTTCCGTGTGTTACGAGTGCAATTGGGAGGGAA
GGGTAGTGGTATTGTCAATCAACAGTTTAAGGAGGTGTCTATTCCTCCAA
GTTTGATGACAGGGACTTCAGATGCACTATTTGACTATATTGCAGTAGAA
CTTGCAAAATTTGTAGCTCAAGAAGGCACAGATTTTCAACTAACTCCTGG
TAGACAAAGGGAGCTTGGTTTCACCTTCTCATTCCCTGTGATGCAAACAT
CCATTTCTTCTGGAAGCCTTCTTAGGTGGACAAAAGGCTTCTCTATAGAT
GACACAGTTGGCCAAGATGTGGTAGCAGAATTAACCAAAGCCATGGAAAG
GCAAGGCCTTGACATGCGTGTTTCAGCTCTGGTGAATGACACCGTTGGAA
CACTTGCTGGAGGTAGGTATACCAACAGTGATGTTGCTGCAGCTGTGATC
CTTGGTACTGGATCAAATGCAGCATATGTGGAACGTGCACATGCAATACC
AAAATGGCATGGTCTACTACCCAAATCAGAAGAGATGGTTATCAATATGG
AGTGGGGTAACTTTAGGTCATCACATCTTCCATTAACAGAGTATGACCAT
GCACTAGATGCTGAGAGTTTAAACCCTGGTGAACAGATTTATGAGAAGAT
AATATCTGGTATGTATTTGGGAGAAATTGTTCGCAGAGTTCTGCTTAGGA
TGGCTGAGGAAGCTGCATTTTTTGGTGACATTGTTCCACCAAAACTTAAA
GTGCCATTTGTATTGAGGACACCTGTCATGTCAGCAATGCACCAGGACAC
TTCCCCTGACCTCAAAGTGGTAGCGAATAAATTGAAAGATACTCTTGAGA
TATCAAATACGTCTGTGAAGATGAGAAAAGTAATTGTTGAGCTTTGCAAC
ATTGTTGCCACCCGTGGGGCACGTCTTTCAGCTGCTGGTATACTAGGCAT
TCTGAAGAAAACGGGAAGAGACACAGTCAAGGTAGGGGAGAAACAAAGAA
CAGTTATAGCTATGGATGGTGGACTATATGAGCACTATGCAGAATTCCGC
AAGTGTTTGGAGAACACCCTAAGCGAATTGCTTGGAGAAGAGGTGTCTGA
AAGCATTGTGGTTGAGCATTCAAATGATGGTTCTGGCATTGGAGCTGCTC
TTCTTGCCGCTTCCCACTCACAGTATGTGGAAATGGAGGAGTCCTGA
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protein sequence of Tc06v2_p008250.1

>Tc06v2_p008250.1 ID=Tc06v2_p008250.1|Name=Tc06v2_p008250.1|organism=Theobroma cacao|type=polypeptide|length=499bp
MGKVAVGVAVVCGVAVAAAAAVVVHRKMKKSGRWVKAMEIVKEFEEKCGT
PIWKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGNEKGLFYAL
DLGGTNFRVLRVQLGGKGSGIVNQQFKEVSIPPSLMTGTSDALFDYIAVE
LAKFVAQEGTDFQLTPGRQRELGFTFSFPVMQTSISSGSLLRWTKGFSID
DTVGQDVVAELTKAMERQGLDMRVSALVNDTVGTLAGGRYTNSDVAAAVI
LGTGSNAAYVERAHAIPKWHGLLPKSEEMVINMEWGNFRSSHLPLTEYDH
ALDAESLNPGEQIYEKIISGMYLGEIVRRVLLRMAEEAAFFGDIVPPKLK
VPFVLRTPVMSAMHQDTSPDLKVVANKLKDTLEISNTSVKMRKVIVELCN
IVATRGARLSAAGILGILKKTGRDTVKVGEKQRTVIAMDGGLYEHYAEFR
KCLENTLSELLGEEVSESIVVEHSNDGSGIGAALLAASHSQYVEMEES*
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