Tc06v2_t007740.1

Overview
NameTc06v2_t007740.1
Unique NameTc06v2_t007740.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1020
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productauxin-responsive protein IAA27
NoteAuxin-responsive protein IAA27
Cross References
External references for this mRNA
DatabaseAccession
GeneID18595976
GenbankXM_007024167.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g007740Tc06v2_g007740Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p007740.1Tc06v2_p007740.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto327113auto327113Theobroma cacaoexon
exon-auto327114auto327114Theobroma cacaoexon
exon-auto327115auto327115Theobroma cacaoexon
exon-auto327116auto327116Theobroma cacaoexon
exon-auto327117auto327117Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto327118auto327118Theobroma cacaoCDS
CDS-auto327119auto327119Theobroma cacaoCDS
CDS-auto327120auto327120Theobroma cacaoCDS
CDS-auto327121auto327121Theobroma cacaoCDS
CDS-auto327122auto327122Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t007740.1 ID=Tc06v2_t007740.1|Name=Tc06v2_t007740.1|organism=Theobroma cacao|type=mRNA|length=1020bp
ATGTCTACACCTTTGGAACATGATTACATAGGCTTAACAGAGACTTCTCC
AATGGAAAGAAGCTCTGAGAAGATCTCTTCTTCTTCTTCTTCCTCTTCAA
CTCACTCCATTGAAGACAAAGCCAACAAAACTACCAACAATACTACTCTT
AATCTCAAAGAAACTGAACTGAGGCTTGGCTTGCCAGGTTCTCAGTCTCC
TGAGAGAAAAGTCTCTCTTTTTGGGAAAGATTTGGAGAGTAATGATAAAA
ATAGTGGTTTTTCTGTAAGCCCTTTGAAGAACTTGGTGTCTGGAGCTAAA
AGGGGTTTCTCAGATGCTATTGATGCGTCTAATGGGAAATGGGTTTTCCC
TATGAATGGTAAATCTGATGTAGAGTTGGCTAAAGGTGCTGGCTTGGCCT
CTTCTAGAGGTTGTTTGGAGAGCAAAAACAATTCCCAGCAAGCAAAGGTA
TCTATACCTGCCATGAAAGAGGTTGGTGGTCTTCCTCAGTCTCCAAAGCC
AGTTCAAGATAAAAAGAATCTTGTTTCTCCTCCAAATGAGCATGCTAGTG
CTCCTGCTGCAAAGGCACAGGTGGTAGGATGGCCACCAATTCGTTCATTC
CGGAAGAATACCATGGCCTCTAATTTGGCGAAGAACAGTGATGATGCTGC
TGGTTGCCTCTATGTAAAGGTGAGCATGGATGGAGCACCGTACCTGAGGA
AGGTTGACCTCAAGACCTACAAAAACTATACGGAACTCTCATCAGCTTTG
GAGAAGATGTTCAGCTGTTTTACCATTGGGCAGTGCAGTTCGCATGGGCT
TCCCGTGCGAGATGGTCTCACCGAGAGTCGCTTGATGGATCTTCTCCATG
GATCTGAATACGTCCTGACATATGAAGACAAGGACGGTGATTGGATGCTT
GTCGGTGATGTTCCGTGGGAGATGTTCACGGATTCATGTAGGAGACTAAG
GATAATGAAAGGTTCGGAGGCAATTGGACTAGCTCCAAGGGCCATGGAGA
AATGCAAGAACCAGACCTAA
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protein sequence of Tc06v2_p007740.1

>Tc06v2_p007740.1 ID=Tc06v2_p007740.1|Name=Tc06v2_p007740.1|organism=Theobroma cacao|type=polypeptide|length=340bp
MSTPLEHDYIGLTETSPMERSSEKISSSSSSSSTHSIEDKANKTTNNTTL
NLKETELRLGLPGSQSPERKVSLFGKDLESNDKNSGFSVSPLKNLVSGAK
RGFSDAIDASNGKWVFPMNGKSDVELAKGAGLASSRGCLESKNNSQQAKV
SIPAMKEVGGLPQSPKPVQDKKNLVSPPNEHASAPAAKAQVVGWPPIRSF
RKNTMASNLAKNSDDAAGCLYVKVSMDGAPYLRKVDLKTYKNYTELSSAL
EKMFSCFTIGQCSSHGLPVRDGLTESRLMDLLHGSEYVLTYEDKDGDWML
VGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKCKNQT*
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