Tc06v2_t007480.1

Overview
NameTc06v2_t007480.1
Unique NameTc06v2_t007480.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1212
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 Protein
Productuncharacterized mitochondrial protein AtMg00810-like
NotePutative Retrovirus-related Pol polyprotein from transposon TNT 1-94
Cross References
External references for this mRNA
DatabaseAccession
GeneID108662443
GenbankXM_018122814.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g007480Tc06v2_g007480Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p007480.1Tc06v2_p007480.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto326585auto326585Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto326586auto326586Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t007480.1 ID=Tc06v2_t007480.1|Name=Tc06v2_t007480.1|organism=Theobroma cacao|type=mRNA|length=1212bp
ATGAGTGCTGAATTGAAAGCTTTACAAGACAGTGAAACATGGAGCATAGT
ACCAAGACCTCTAAATTCTCATGTAATTGGGTGCAAGTGGGTGTACAAAG
TGAAGTTGAATGCAGATGGACAAATTGAAAGATATAAAGCTCGCTTGGTT
GCAAAAGGGTATAATCAAATTGCAGGTTTTGACTACAAAGAGACTTTCAG
TCCTGTATCTAAGCAAACAACAGTAAGAGTATTCTTTGCCATAACAGCAG
CTTTCAATTGGCATCTAACACAGTTGGATGTGAACAATGCATTCTTGAAT
GGAGATTTAAAGGAGGAGGTGTACATGGACATACCACCAGGATATGAGAT
CCAAGGGGAGTATCCAGAGAATGTGAAATTGGTCTGCAAACTTCATAAGT
CACTATATGGCTTAAAGCAAGCATCTAGGGAGTGGAATGCCAAAATCAAG
TCTTTTATTATACAATATGGTTTTATTCAGTCCAATGCAGATCACTCACT
GTTTACTATGAAGACAAACAATGGTGAGTTCATTGCACTCTTATTGTATG
TAGATGACATAGTAGTAGGGAGTTCTTCAAAACAAGCTGCAGATGATGTG
AAATTGTTCCTAAGTTCACATTTTAAGCTCAAGGATTTAGGAACAGTCAA
ATATTTTCTCGGGTTAGAAATAGCAAGATCTCCTGAAGGTATCTCCATAT
CACAAAGAAAATACACTTTGGATCTCTTAGAAGAACATGGGTTGTTAGGT
GCAAAACCAGTCTCCACTCCCATTGATTATAATCAGAAGTTAGTCAAGGC
TCAAGATGAAGAGAAGCTTATCAATTCAACAAACTACAGACAATTAGTTG
GGAAATTACTGTACCTCACATTCAGCAGACTAGACATAGCATATGCAGTT
CAAGTATTGTCACAGTTTATGGACAAGCCTAGTCTTGAACATATGAATGT
AGCTCACAGGGTGCTAAAATATCTGAAGGGGTCACTTGGCCAAGGTATCC
TAATGAAGTCAGAATCAAATTTAATGATTGTGGGATACTGTGACAGTGAT
TGGGCAGGTTGTCCTAATTCTAGGAAGTCAGTCACAGGATACAATATGTT
CATTGGAAATTCTTTAGTGACATGGAAATCTAAGAAACAATCAGTGGTGT
CTCGAAGCTCAGCAGAAGCTGAGTACAGAGCAATGGCATCAACTAGTTGT
GAAATTATCTAG
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protein sequence of Tc06v2_p007480.1

>Tc06v2_p007480.1 ID=Tc06v2_p007480.1|Name=Tc06v2_p007480.1|organism=Theobroma cacao|type=polypeptide|length=404bp
MSAELKALQDSETWSIVPRPLNSHVIGCKWVYKVKLNADGQIERYKARLV
AKGYNQIAGFDYKETFSPVSKQTTVRVFFAITAAFNWHLTQLDVNNAFLN
GDLKEEVYMDIPPGYEIQGEYPENVKLVCKLHKSLYGLKQASREWNAKIK
SFIIQYGFIQSNADHSLFTMKTNNGEFIALLLYVDDIVVGSSSKQAADDV
KLFLSSHFKLKDLGTVKYFLGLEIARSPEGISISQRKYTLDLLEEHGLLG
AKPVSTPIDYNQKLVKAQDEEKLINSTNYRQLVGKLLYLTFSRLDIAYAV
QVLSQFMDKPSLEHMNVAHRVLKYLKGSLGQGILMKSESNLMIVGYCDSD
WAGCPNSRKSVTGYNMFIGNSLVTWKSKKQSVVSRSSAEAEYRAMASTSC
EII*
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