Tc06v2_t006010.2

Overview
NameTc06v2_t006010.2
Unique NameTc06v2_t006010.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length771
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
Productacyl-protein thioesterase 2, transcript variant X1
NotePutative Probable carboxylesterase Os04g0669500
Cross References
External references for this mRNA
DatabaseAccession
GeneID18595774
GenbankXM_007023875.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g006010Tc06v2_g006010Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p006010.2Tc06v2_p006010.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto323588auto323588Theobroma cacaoexon
exon-auto323589auto323589Theobroma cacaoexon
exon-auto323590auto323590Theobroma cacaoexon
exon-auto323591auto323591Theobroma cacaoexon
exon-auto323592auto323592Theobroma cacaoexon
exon-auto323593auto323593Theobroma cacaoexon
exon-auto323594auto323594Theobroma cacaoexon
exon-auto323595auto323595Theobroma cacaoexon
exon-auto323596auto323596Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto323597auto323597Theobroma cacaoCDS
CDS-auto323598auto323598Theobroma cacaoCDS
CDS-auto323599auto323599Theobroma cacaoCDS
CDS-auto323600auto323600Theobroma cacaoCDS
CDS-auto323601auto323601Theobroma cacaoCDS
CDS-auto323602auto323602Theobroma cacaoCDS
CDS-auto323603auto323603Theobroma cacaoCDS
CDS-auto323604auto323604Theobroma cacaoCDS
CDS-auto323605auto323605Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t006010.2 ID=Tc06v2_t006010.2|Name=Tc06v2_t006010.2|organism=Theobroma cacao|type=mRNA|length=771bp
ATGAGCTATTCACATCATTCCATGGGCTCTGGAAGTAGAACTACTAGAAG
GTCATTTGACTTTGGAAGGACGCATGTGGTTCGACCAAAAGGGAAACACC
AGGCAACTATAGTGTGGCTTCATGGACTCGGTGACAATGGCTCCAGCTGG
TCCCAGCTCTTGGAAAGTCTTCCTCTTCCAAATATAAAATGGATTTGCCC
AACTGCTCCAACTCGTCCTGTCGCTTTACTTGGGGGATTTCCTTGCACTG
CATGGTTTGATGTGGGTGAGCTTTCAGAAGATGGTCCGGATGATTGGGAG
GGTTTAGATGCTTCAGCAGCACATATTGCAAACTTGTTGTCGACGGAGCC
ATCTGATGTTAAGGTGGGTATCGGAGGCTTTAGTATGGGTGCTGCGATGG
CCCTTTACTCTGCAACTTCTTGTGCTCTGGGAAGGTATGGAAATGGCAAC
CCATACCCCATCAACCTAACGGTAGTTGTTGGACTAAGTGGATGGCTACC
AGGTTCAAGGGGCTTAAGGAACAAAATAGAAGTATCACATGAAGCTGCAA
GGCGCGCGGCATCCTTGCCAATTTTGCTCAGCCATGGAACTTGTGATGAT
GTTGTCCCCTTCAAATTCGGAGAAAAATCTGCCCATTCCTTGAATATAGC
AGGATTTCAATACCTCACTTTTAAAACCTATGAGGGGATTGGTCATTACA
CAGTTCCTAAAGAGATGGATGAGGTCTGCAATTGGCTTACAGCAAGGCTG
GGGCTTGAGGGGTCCCGCTAA
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protein sequence of Tc06v2_p006010.2

>Tc06v2_p006010.2 ID=Tc06v2_p006010.2|Name=Tc06v2_p006010.2|organism=Theobroma cacao|type=polypeptide|length=257bp
MSYSHHSMGSGSRTTRRSFDFGRTHVVRPKGKHQATIVWLHGLGDNGSSW
SQLLESLPLPNIKWICPTAPTRPVALLGGFPCTAWFDVGELSEDGPDDWE
GLDASAAHIANLLSTEPSDVKVGIGGFSMGAAMALYSATSCALGRYGNGN
PYPINLTVVVGLSGWLPGSRGLRNKIEVSHEAARRAASLPILLSHGTCDD
VVPFKFGEKSAHSLNIAGFQYLTFKTYEGIGHYTVPKEMDEVCNWLTARL
GLEGSR*
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