Tc06v2_t005910.1

Overview
NameTc06v2_t005910.1
Unique NameTc06v2_t005910.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length300
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Productlate embryogenesis abundant protein 2
NotePutative Late embryogenesis abundant protein 76
Cross References
External references for this mRNA
DatabaseAccession
GeneID18595763
GenbankXM_007023853.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g005910Tc06v2_g005910Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p005910.1Tc06v2_p005910.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto323471auto323471Theobroma cacaoexon
exon-auto323472auto323472Theobroma cacaoexon
exon-auto323473auto323473Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto323474auto323474Theobroma cacaoCDS
CDS-auto323475auto323475Theobroma cacaoCDS
CDS-auto323476auto323476Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t005910.1 ID=Tc06v2_t005910.1|Name=Tc06v2_t005910.1|organism=Theobroma cacao|type=mRNA|length=300bp
ATGGCAAGCCGTACTGCTCAGAATATTGGAAACCAGGGTGGTGACATCAC
AGGTCAAGCTCAGGTAAAGAAGGATGAGACCATGAATCAGGCATCCCAGG
GCACCAACACTCAGTCTTCTGACCAGAACTCTTCTATTGCTTCCCAGGCC
ACCAACTTCCTTCAGCAGACAGGAGAGCAAGTGAAGAACATGGCACAGGG
AGCAGCTGATGCAGTAAAGAACACTTTGGGAATGAACAATGACAACAGCT
CCAATGCCCCCAGCACCAACCATCCAAGCAACCCATCTCCCAGGACTTGA
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protein sequence of Tc06v2_p005910.1

>Tc06v2_p005910.1 ID=Tc06v2_p005910.1|Name=Tc06v2_p005910.1|organism=Theobroma cacao|type=polypeptide|length=100bp
MASRTAQNIGNQGGDITGQAQVKKDETMNQASQGTNTQSSDQNSSIASQA
TNFLQQTGEQVKNMAQGAADAVKNTLGMNNDNSSNAPSTNHPSNPSPRT*
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