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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns |
Product | probable disease resistance protein At1g12280 |
Note | Putative Disease resistance protein RPS5 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
CDS-auto315501 | auto315501 | Theobroma cacao | CDS |
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc06v2_t001990.1 ID=Tc06v2_t001990.1|Name=Tc06v2_t001990.1|organism=Theobroma cacao|type=mRNA|length=2787bp ATGGGCAATTTGTGCTCAATCCAAATCTCAACAGATCACACAGTCTCTCG TTGTTGGGATTGCATAGTTGGACGAGCGAATTACACTTGTAAGCTAGAGA AAAACCTTAGAGCTCTGCGTGTTGCAGTGGAGGAATTGAAAGCACTAAGA GATGACGTGAATCGGAGGGTTCATTGTGCTGAACAACAACTCATGATCAA GCGGCTTAGCCAAGTTCAAGTTTGGCTTTCAAGAGCGGAAACTATGATAA TGGAATCTGAGGAATTGATAAGAGATGCCTCTACAGAAAAGGAGAAACTA TGTCTCGCAGGCTGCTTCTCCAAGAATTGCAAATCTAGCTACAAGTTTGG TCGACAAGTGGCTAAGAAACTTAAACAAGTAGTTGAGCTAAAGAGTAAAG GAGTTTTTGACAAGGTAGCTGAGAACGAACCTACAGGTCCAGTGGATGTG AGACCGATTGAGCCCACCGTGGGCTTGGAATCAACATTGGCTAAGGTCTG GAGCTTGCTCCAAGACAAACAAGTTGGAATGATTGGTTTATACGGATTGG GAGGAGTTGGGAAGACAACACTCTTGACCCAAGTTAACAACAAGTTGAGT GGTAATCCATTAGATTTTGATGTTGTAATTTGGGTGGTGGTGTCTAAAGA TCACACGGTCGAAACCGTTCAAGAAAAGATTGGGAAAAGGGTAGGCCTTT TTAATGGGTGGATGCAGAATAAAAGTTCTGATGAGAAAGCTGTAGACATC TTCAGGATTTTGAGTAAAAGAAAATTCGTTTTGTTCTTGGATGATGTATG GGAACGGGTGCATTTAACCAAGATAGGGATACCTTTGCCGAGCCAGGAAA ATGGTTCCAAGGTTGTTTTCACTACTCGTTTTTTAGAGATATGTAACGAA ATGGAAGCTCAGAAAGTCAAGGTAGAGTGTTTGAGAGCAAATGAAGCTTG GGAATTGTTTCGAGAGAAAGTTGGAGAAGAAACCCTTCATAGCCATCCAG ATATTCCAGGGTTAGCCCAAAAGATGGCTGCAAAGTGTGGTGGGTTGCCT CTTTCACTAATTACTATTGGCCGAGCCATGGCCAGCAAGAAGACTCCCCA AGCATGGGAATACGCAATTGAGGTCCTGAAGAAATCTGCACATAAATTGG CAAGAATGGGACAAGAGGTGTATCCTGTTTTAAAATTCAGTTATGATAGT TTGCATTGTGACACGATGAGATCTTGCCTCTTGTACTGTGGTTTGTATCC TGAAGATGTTCTTATTTTGAAATCTGAGCTGATAGAGTATTGGTTCTGTG AGGGGCTCTTGGATGAATTTGACAGCGTAAGAAGAGCTCGATTGCAAGGA TACAACATCATCGATTCTCTTGTTAATTCTTGTTTATTAGAAGAAGATGG AGAATACTACGTGAAGATGCATGATGTGATTCGTGACATGACATTGTGGA TAGCAGGCGAGTCTGAAGCACCTGAAAAGAGCTTTTTTGTACAAGCAGGG CTCCAATTGACTGAAACACCAGATGTTGGAAAATGGGAAAATGTAAGAAG ATTATCATTGGCAGGCAATAAAATCAAAGATCTCACATCAACACCCACAT GTCCTAATCTTGAAACTTTGTTACTTAACTATAATGAGTTGGAGGTGATC AGTGATGGCTTCTTCAAATTGATGCCTAATCTCAGAGTTTTGAACTTGGC AGGTAACCGGGGTCTGAGACAATTGCCAGAGGGAATTTCAGAATTGGTTT CACTGGAATGTCTTAATCTATCACGGACAGGGTTAAGAGAGCTGTCAATT AAGCTGAAGAGCCTGACGAAATTAAGATACCTGGACCTGAGATACACGGA CGATCTTAGAAGAATTCCAGGGAAGCTGATATCTAGCTTCCCAAAGCTGC AAATATTCAGAATGTTTCGGTCTGGTGGTGGTTATTCTCAAGAAGAAATG GTTGCAGACAATGAAGATGGAATAGTGGAATTGGGGTGCTTGCCACATTT GAATGGAGGGATTAATGATTTTCATAATCCATACGAAACAGAAGGAGACA ATCTCCTGAATGATGGTAATGAAGGTCTAATAGAGGAATTGGGGTGTTTG CAATCTTTGAATACGCTGAGTATTCATATAATGAGTGCTTCTGCTCTTGA AAGATTTTTGAGCTTCCCCAACTTACCAGGCTGCACTCAAGAACTATCTC TTTGTGCTTTTAAAGAGTCAAAGTCATTAAATGTTTTATCTTTAGCAAAT ATGCAGTGTCTAGAGAGACTAGATATCAGTGAATGTGCAAGACTGGAAGA GATGAAGATAGAGAAGGAAGGGGAAGGAAGAATGATACAAGCCTCACTGT TTCGTACCCTTCGAGAGGTTACCATATTTGAGTGCGGCAATTTGAGGGAC ATGACATGGATTATTCTTGTTCCAAATCTAAGATTTCTTTGGGTTGTTAA TTGCCTAAAAATGGAAGAAATAATGAGCAAGGAAAAAATGAGTGAAGCTG CAGATCTGGTTAGAAGTTTGAATCCAAACCCATTTGCTAAGCTACAAAAT CTTACTTTACAATTTTTACCAGAGTTGAAGAGTATACACTGGGATGTGCT ACCCTTCCCATGTTTGACAGAAATATTTGTGAGAGAATGCCCCAAACTGA GGGAGCTCCCTCTTAGCTCGGACAGTGCTAAGGGAAATCCAATCTGCATT CAAGGAGAAAAGGAGTGGTGGGAAACGCTAGAATGGAAGAATAAAGCCAC TCAGAATGCTTTTCTGCCTTTCTTCGAACCCCACTGA back to topprotein sequence of Tc06v2_p001990.1 >Tc06v2_p001990.1 ID=Tc06v2_p001990.1|Name=Tc06v2_p001990.1|organism=Theobroma cacao|type=polypeptide|length=929bp
MGNLCSIQISTDHTVSRCWDCIVGRANYTCKLEKNLRALRVAVEELKALR DDVNRRVHCAEQQLMIKRLSQVQVWLSRAETMIMESEELIRDASTEKEKL CLAGCFSKNCKSSYKFGRQVAKKLKQVVELKSKGVFDKVAENEPTGPVDV RPIEPTVGLESTLAKVWSLLQDKQVGMIGLYGLGGVGKTTLLTQVNNKLS GNPLDFDVVIWVVVSKDHTVETVQEKIGKRVGLFNGWMQNKSSDEKAVDI FRILSKRKFVLFLDDVWERVHLTKIGIPLPSQENGSKVVFTTRFLEICNE MEAQKVKVECLRANEAWELFREKVGEETLHSHPDIPGLAQKMAAKCGGLP LSLITIGRAMASKKTPQAWEYAIEVLKKSAHKLARMGQEVYPVLKFSYDS LHCDTMRSCLLYCGLYPEDVLILKSELIEYWFCEGLLDEFDSVRRARLQG YNIIDSLVNSCLLEEDGEYYVKMHDVIRDMTLWIAGESEAPEKSFFVQAG LQLTETPDVGKWENVRRLSLAGNKIKDLTSTPTCPNLETLLLNYNELEVI SDGFFKLMPNLRVLNLAGNRGLRQLPEGISELVSLECLNLSRTGLRELSI KLKSLTKLRYLDLRYTDDLRRIPGKLISSFPKLQIFRMFRSGGGYSQEEM VADNEDGIVELGCLPHLNGGINDFHNPYETEGDNLLNDGNEGLIEELGCL QSLNTLSIHIMSASALERFLSFPNLPGCTQELSLCAFKESKSLNVLSLAN MQCLERLDISECARLEEMKIEKEGEGRMIQASLFRTLREVTIFECGNLRD MTWIILVPNLRFLWVVNCLKMEEIMSKEKMSEAADLVRSLNPNPFAKLQN LTLQFLPELKSIHWDVLPFPCLTEIFVRECPKLRELPLSSDSAKGNPICI QGEKEWWETLEWKNKATQNAFLPFFEPH* back to top
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