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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 35 ESTs, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns |
Product | phospholipase D alpha 1, transcript variant X2 |
Note | Phospholipase D alpha 1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc06v2_t001860.2 ID=Tc06v2_t001860.2|Name=Tc06v2_t001860.2|organism=Theobroma cacao|type=mRNA|length=2430bp ATGGAGGATATATTGCTTCATGGGACTTTACATGTTACGATCTATGAAGC TGATAAGCTTCATAGTGGTGGTGGAGGTGGTCACTTCTTCCGGAAGCTTA TGGCTAATGTTGAGGAGACAATTGGTATTGGCAAAGGAATTCCAAAGATT TACGCAACTATTGATCTTGAAAGGGCTAGAGTTGGAAGAACCAGAATAAT AGAAAAAGAAATTTCCAACCCAAGGTGGTACGAGTCTTTTCACATTTACT GTGCCCATCGAGCTTCCAATGTAGTATTCACTGTCAAGGATGACAATCCT ATTGGAGCCACTCTGATTGGAAGAGCATATGTATCTGTTGATGAACTCTT AAGTGGAGAAGAAGTGGATAGGTGGGTTGAGATCCTGGATGAAGACAAGA ATCCTATAGAAAGTGGTGGTAAAATCCATGTGAAGCTTCAATATTTTGAT GTGACGAGGGACCGCAACTGGAATCGCGGCATCATAAGTCGGAAATTTCC TGGAGTTCCATTTACATTTTACTCACAGAGACAAGGATGTAAGGTTTCTC TATACCAGGATGCTCATATCCCAGATGGATTTGTTCCTAAAATTCCTCTT GCTGGAGGCAAATATTTTGAGCCACATAGATGTTGGGAAGATGTTTTTGA TGCTATCACCAATGCTAAACACTTGATCTGCATTACTGGCTGGTCTGTTT ATACTGAGATCACTTTGGTGAGAGACTCAAGAAGGCCAAAGCCTGGGGGA GACATCACTCTTGGTGATCTGCTTAAAAAGAAAGCAAGTGAAGGTGTCAG GGTTAATATGCTTGTTTGGGATGACAGAACATCTGTTGGTTTGCTGAAGA AGGATGGACTGATGGCAACCCATGATGAGGAAACTGAAAACTTCTTCAAG GATACTGATGTCAACTGTGTCTTATGCCCTCGTAATCCAGACGATGGTGG AAGTTTTGTCCAGGATTTACAGATTTCTACCATGTTCACTCATCACCAGA AAATTGTTGTGGTGGATGCTGCAATGCCTAATGGAGATACAGAGACGAGG AGAATTGTGAGTTTTGTCGGAGGTATTGATCTTTGTGATGGCAGATATGA CACCCCTTTCCATTCCCTTTTCAGGACCTTGGACACGGCTCACCATGATG ATTTCCATCAGCCAAACTTTACTGGTGCTGCAATCACCAAAGGTGGTCCA AGGGAACCTTGGCACGACATCCACTCCCGACTTGAAGGGCCAATTGCTTG GGATGTCTTGTTCAATTTTGAGCAAAGATGGAAAAAACAAGGTGGTAAAG ATGTGCTTGTTAAGCTGAGGGAGCTTGAAGGTATCATCATCCCCCCATCT CCAGTTACGTTCCTTGATGACCATGAGACTTGGAATGTGCAATTATTTAG ATCCATTGATGGTGGGGCTGCTTTTGGATTCCCTGAGACACCAGAAGATG CTGCCAGGGCTGGGCTTGTCAGTGGAAAGGACAATATTATTGACCGAAGT ATTCAGGATGCCTATATTAATGCTATCAGACGAGCAAAGAATTACATCTA TATTGAAAATCAGTATTTCCTTGGAAGCTCCTTTGGCTGGAGTGCTGATG GCATTAAGCCTGAGGATATCAATGCTTTGCATCTGATTCCAAAAGAGCTT TCACTTAAGATTGTTAGCAAGATTCAGGCAGGAGAGAGGTTTACAGTTTA TGTTGTTGTCCCTATGTGGCCAGAAGGAATCCCAGAGAGTGCATCAGTTC AGGCAATATTAGATTGGCAGAAAAGGACAATGGACATGATGTATAGTGAT ATCATTAATGCTCTCAGAGATAAGGGTAGTGAGGAGGATCCCCGAAACTA TTTAACATTCTTCTGCCTTGGGAACCGGGAGGTGAAGAATGGTGGAGAAT ATGAACCTTCAGAAAAGCCAGAGCCTGATACAGATTATGCCAGAGCCCAG GAGGCCCGTCGTTTCATGATCTATGTTCATGCCAAAATGATGATTGTTGA TGATGAATACATAATAATTGGATCAGCCAACATTAACCAACGATCAATGG ATGGTGCTAGAGACTCTGAGATAGCCATGGGAGCCTATCAACCATATCAT CTATCAGTTAGGCAACCGGCACGAGGTCAGGTCCATGGTTTCCGTATGGC ACTGTGGTATGAGCACCTTGGCATGCTTGATGATACCTTCCTCTTTCCAG AAAGTGAGGAGTGTGTCAGGAAGGTGAACCAGATTGCTGACAAATATTGG GATCTGTATTCAAGTGAGTCACTTGAGCGAGACTTGCCTGGTCACCTCCT TCGATACCCCATTGGTATTTCTAGTGAGGGAACCGTAACTGAACTGCCAG GCTTTGAGTTCTTCCCTGACACAAAGGCTCGTGTTCTTGGTGCCAAATCT GATTACCTCCCCCCTATCCTCACTACTTAG back to topprotein sequence of Tc06v2_p001860.2 >Tc06v2_p001860.2 ID=Tc06v2_p001860.2|Name=Tc06v2_p001860.2|organism=Theobroma cacao|type=polypeptide|length=810bp
MEDILLHGTLHVTIYEADKLHSGGGGGHFFRKLMANVEETIGIGKGIPKI YATIDLERARVGRTRIIEKEISNPRWYESFHIYCAHRASNVVFTVKDDNP IGATLIGRAYVSVDELLSGEEVDRWVEILDEDKNPIESGGKIHVKLQYFD VTRDRNWNRGIISRKFPGVPFTFYSQRQGCKVSLYQDAHIPDGFVPKIPL AGGKYFEPHRCWEDVFDAITNAKHLICITGWSVYTEITLVRDSRRPKPGG DITLGDLLKKKASEGVRVNMLVWDDRTSVGLLKKDGLMATHDEETENFFK DTDVNCVLCPRNPDDGGSFVQDLQISTMFTHHQKIVVVDAAMPNGDTETR RIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFTGAAITKGGP REPWHDIHSRLEGPIAWDVLFNFEQRWKKQGGKDVLVKLRELEGIIIPPS PVTFLDDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRS IQDAYINAIRRAKNYIYIENQYFLGSSFGWSADGIKPEDINALHLIPKEL SLKIVSKIQAGERFTVYVVVPMWPEGIPESASVQAILDWQKRTMDMMYSD IINALRDKGSEEDPRNYLTFFCLGNREVKNGGEYEPSEKPEPDTDYARAQ EARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYH LSVRQPARGQVHGFRMALWYEHLGMLDDTFLFPESEECVRKVNQIADKYW DLYSSESLERDLPGHLLRYPIGISSEGTVTELPGFEFFPDTKARVLGAKS DYLPPILTT* back to top
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