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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 4 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns |
Product | DExH-box ATP-dependent RNA helicase DExH9, transcript variant X2 |
Note | DExH-box ATP-dependent RNA helicase DExH9 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc06v2_t001490.2 ID=Tc06v2_t001490.2|Name=Tc06v2_t001490.2|organism=Theobroma cacao|type=mRNA|length=2964bp ATGGGGTCGTTGAAGAGGAAGTCGGAAGGAGAGGAGGCATCCTCGGAGTC TCTGCCGCAGAAACAACACAAGGGAGATGGCTCAGTCATGGCGGACGAAG CCGTGGGGTGTGTACATGAAGTTTCATACCCAGATGGTTATGTTCCTTCA ACTTCCTCTACAGTTCCAGCTGACTCTAAACCCGCCAAGGAATTTCCTTT TACTCTCGACCCTTTTCAGTCTGAAGCTATCAAGTGCCTCGATAATGGCC AATCTGTCATGGTGTCAGCGCATACATCAGCCGGGAAAACTGTAGTAGCG TTGTATGCAATTGCTATGTCTTTGCGGAATAACCAGCGGGTTATATATAC TTCACCTATTAAGGCTCTCAGCAACCAAAAGTATAGAGAGTTTAAAGAAG AGTTTTCCGATGTCGGTTTGATGACTGGAGACGTTACAATTGACCCTAAT GCTTCTTGCTTGGTGATGACCACCGAAATCTGGCGTAGTATGCAGTATAA AGGGTCGGAGGTTGTTCGGGAGGTGGCATGGATTGTTTTTGATGAAGTGC ACTACATGCGTGATCGTGAAAGAGGTGTTGTGTGGGAAGAGAGTATTGTT ATGGCACCAAAGAACTCTCGGTTTGTATTTCTTTCAGCAACTGTGCCTAA TGCAAAGGAATTTGCTGATTGGGTGGCAAAGGTTCACAAGCAACCATGCC ACATTGTTTACACTGATTATCGACCAACACCTCTTCAGCATTATATTTTC CCTGCTGGAGGTGATGGTCTATTTTTGGTGGTAGATGAGAAAGGAAAATT TCGTGAGGATAGCTTTCAGAAAGCTTTAAATGCTCTAGTTCCTACAAGTG AAAGTAACAAGAAAAGAGATAATGGTAAATCACAGAAGGGGTTAGTGATG GGAAAAGTTAGTGAACAAAGTGACATCTTCAAGTTGGTGAAAATGATCAT TCAGCGACAGTATGACCCTGTGATAATTTTCAGCTTTAGCAAAAGGGAAT GTGAATTTCTTGCAATGCAGATGGCAAAGATGGATTTAAATGATGATGAT GAGAAAGGAAACATAGAAACAATCTTTTGGAGTGCCATGGATATGCTTTC CGATGATGATAAGAAGTTACCTCAGGTATCAAACATGTTACCCCTTTTGA AACGGGGAATAGGTGTGCATCATTCCGGCTTGCTTCCCATTCTAAAGGAA GTGATTGAGATATTATTTCAGGAAGGGCTGATTAAGTGTTTGTTTGCCAC AGAGACCTTCAGTATTGGGTTAAACATGCCTGCTAAAACTGTTGTGTTTA CAAATGTTCGTAAATTTGATGGGGACAAGTTTAGATGGATATCTAGTGGA GAGTACATACAAATGAGTGGCCGTGCTGGTCGTCGAGGTATTGATGCACG CGGAATATGCATTCTTATGGTGGATGAAAGGATGGAACCATCTACTGCTA AAACAATGCTCAAGGGAAATGCTGATAGTTTGAACAGTGCCTTCCACCTA AGCTACAATATGCTATTGAATCAATTGTGCTGTGAAGACGCTGATCCTGA AAGTATGCTTCGTAATTCGTTCTATCAGTTTCAAGCCGATCGTGCAATTC CTGACCTTGAGAAACAAATAAAGGCTCTGGAAGAAGAGAGGGATTCCATG ATAATTGAAGAAGAAGATAGTTTGAAGAATTATTACAATCTGATTCGGCA ATACAAAAGTTTGAAAAATGATGTTCGTGATATCGTGTTTTCTCCAAAGT ATTGCTTACCCTATATGAAATCTGGCAGGCCAGTATGTATACAATGCATT GATGATGAAAAGTCTCCATCTTTCTCCATTGAGGACCAAGTTACCTGGGG TGTTTTAATGGACTTCCATAGAGTAAAAAGTGTTGTTGAAGATGATGCCA GTAGAAGACCAGAAGATGCAAGCTATGGCCTTGATATTCTTACAAGATGT GCTGTGAGCAAAGATGGTCTTGGAAAGAAAAAAATTAAGATTGTCCCTTT GAAAGAGCCTGGGGAACCTCTTGTTGTTTCTGTGCCTCTCTCTCAGGTTA TCAGTCTAAGTAGTGCACGCTTGAACATACCCAAAGATCTTCTGCCGTTA GAAGCTCGCGAGAATGCCTTGAAGAAGCTTTTAGAATTTATTTCTAGATA TGCTAATGGGATGCCCTTGGAACCCGAAGAGATGAATATACAAAGTAACT CATACAAAAAGGCAGTCCGTAGGTTGGAGGCATTAGAGAACCTGTTTGAA AAACATGAAATTGCAAAATCCCCACTTATTGAGCAAAAGCTTAAAGTTCT GAACGGAAAGGAAGAATTGACAGCCAAGATCAGATCAATTAAGAAAACAA TGCGTTCTTCCACAGCATTGGCTTTTAAAGATGAGCTTAAGGCCAGGAAA CGGGTTCTAAGGAGGCTAGGATACATTACGAGTGATGATGTTGTTGAGTT GAAGGGCAAGGTTGCTTGTGAGATCAGTAGTGCTGATGAGTTGACTCTAA CAGAGCTAATGTTCAGTGGGATTTTTAAGGATGTAAAGGCAGAAGAAATG GTGTCTCTGCTCTCTTGTCTTGTTTGGCAGGAGAAGCTTCAAGATGCTGC AAAGCCCAGGGAAGAACTTGAGTTGCTCTTTACACAACTACAAGATACAG CACGGAGGATTGCCAAAGTTCAACTTGAGTGCAAGGTCCAAATTGATGTG GAAAGCTTTGTAAGTTCATTTCGACCAGATATTATGGAAGCTGTATATGC CTGGGCAAAAGGATCCAAGTTCTATGAGATTATGGAAATTACTCAGGTCT TTGAGGGCAGCTTAATCAGAGCCATCAGAAGACTTGAAGAAGTTCTTCAG CAGCTTATTTCAGCAGCCAAGTCAATTGGAGAGACAGAGCTCGAGTCAAA ATTCGAAGAGGCTGTCTCTAAGATTAAAAGAGACATAGTATTTGCAGCAT CTCTATACTTGTAG back to topprotein sequence of Tc06v2_p001490.2 >Tc06v2_p001490.2 ID=Tc06v2_p001490.2|Name=Tc06v2_p001490.2|organism=Theobroma cacao|type=polypeptide|length=988bp
MGSLKRKSEGEEASSESLPQKQHKGDGSVMADEAVGCVHEVSYPDGYVPS TSSTVPADSKPAKEFPFTLDPFQSEAIKCLDNGQSVMVSAHTSAGKTVVA LYAIAMSLRNNQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDPN ASCLVMTTEIWRSMQYKGSEVVREVAWIVFDEVHYMRDRERGVVWEESIV MAPKNSRFVFLSATVPNAKEFADWVAKVHKQPCHIVYTDYRPTPLQHYIF PAGGDGLFLVVDEKGKFREDSFQKALNALVPTSESNKKRDNGKSQKGLVM GKVSEQSDIFKLVKMIIQRQYDPVIIFSFSKRECEFLAMQMAKMDLNDDD EKGNIETIFWSAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKE VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSG EYIQMSGRAGRRGIDARGICILMVDERMEPSTAKTMLKGNADSLNSAFHL SYNMLLNQLCCEDADPESMLRNSFYQFQADRAIPDLEKQIKALEEERDSM IIEEEDSLKNYYNLIRQYKSLKNDVRDIVFSPKYCLPYMKSGRPVCIQCI DDEKSPSFSIEDQVTWGVLMDFHRVKSVVEDDASRRPEDASYGLDILTRC AVSKDGLGKKKIKIVPLKEPGEPLVVSVPLSQVISLSSARLNIPKDLLPL EARENALKKLLEFISRYANGMPLEPEEMNIQSNSYKKAVRRLEALENLFE KHEIAKSPLIEQKLKVLNGKEELTAKIRSIKKTMRSSTALAFKDELKARK RVLRRLGYITSDDVVELKGKVACEISSADELTLTELMFSGIFKDVKAEEM VSLLSCLVWQEKLQDAAKPREELELLFTQLQDTARRIAKVQLECKVQIDV ESFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQ QLISAAKSIGETELESKFEEAVSKIKRDIVFAASLYL* back to top
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