Tc05v2_t027300.1

Overview
NameTc05v2_t027300.1
Unique NameTc05v2_t027300.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length990
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
Productperoxidase 5
NotePeroxidase 5
Cross References
External references for this mRNA
DatabaseAccession
GeneID18600622
GenbankXM_007031174.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g027300Tc05v2_g027300Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p027300.1Tc05v2_p027300.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto309939auto309939Theobroma cacaoexon
exon-auto309940auto309940Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto309941auto309941Theobroma cacaoCDS
CDS-auto309942auto309942Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t027300.1 ID=Tc05v2_t027300.1|Name=Tc05v2_t027300.1|organism=Theobroma cacao|type=mRNA|length=990bp
ATGCAGACCTTAAACTCCTCCTGCTTCTGCTTCACCACTTTCTTTCTTGC
TATGTTCTTGACGATTTCATTTTCATCAGCAACGCTTAAGGTTGGGTTCT
ATCAATCAAGCTGCCCTTCTGCAGAGGCTGCCGTGAGAAAAGCTGTGGAT
AAGGCTGTGTCCAGGAACCCTGGCATGGCTGCTGCCCTCATCAGGATGCA
TTTCCATGATTGTTTTGTGAGGGGCTGTGATGCTTCTGTCCTTTTGGATT
CAACGCCAGGCAGACCATCAGAGAAGGAGCATCCTGCTAACAATCCAAGC
TTGAGAGGCTTCGAAGTGATTGATCAAGCTAAGGCTGAAATTGAAGCACA
ATGTCCCCGGACAGTCTCATGTGCAGATATCCTTGCATTTGCTGCTCGTG
ACAGTGCCTATAAAGTTGGTGGTATTAAATATGCAGTGCCTTCAGGACGT
CGGGATGGAAGAGTTTCACTGCGAGATGAGGGGTTCGGGAACCTCCCCCC
ACCTTTCTTCAACGCCAAGCAACTTGAAGATAACTTTGCTCGAAAGGGCC
TTAACCTTGATGAAATGGTCACACTTTCTGGGGCACATTCCATTGGCGTG
TCACACTGTTCGTCTTTCTCTAATCGTTTATTCTCTTTCAACGCAACTCA
CCTACAAGACCCTTCATTGGATCCTGAATTCGCTAGGCAACTGAGGAAGA
GGTGCCCCGCACCTGGATCCAGCCGTGACCCTACCGTGCCACTCGATGTT
CTTTCACCACACAGGCTAGACAACAAGTACTATGAAGTTTTGAAAAATCA
CCATGGCTTGTTAACATCTGATCAAACTCTTCTAAGCAGTCGTGCAACGG
CAAAAATAGTAAGGGAGAATGCGAGGCATGGAAAAGCGTGGGCCAAGAAG
TTTACTGCAGCAATGGTGAAGATGGGCTATATTGATGTGCTCACAGGGTC
AAAGGGTGAGATCAGGAAGAATTGCAGGGTTGTGAACTAA
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protein sequence of Tc05v2_p027300.1

>Tc05v2_p027300.1 ID=Tc05v2_p027300.1|Name=Tc05v2_p027300.1|organism=Theobroma cacao|type=polypeptide|length=330bp
MQTLNSSCFCFTTFFLAMFLTISFSSATLKVGFYQSSCPSAEAAVRKAVD
KAVSRNPGMAAALIRMHFHDCFVRGCDASVLLDSTPGRPSEKEHPANNPS
LRGFEVIDQAKAEIEAQCPRTVSCADILAFAARDSAYKVGGIKYAVPSGR
RDGRVSLRDEGFGNLPPPFFNAKQLEDNFARKGLNLDEMVTLSGAHSIGV
SHCSSFSNRLFSFNATHLQDPSLDPEFARQLRKRCPAPGSSRDPTVPLDV
LSPHRLDNKYYEVLKNHHGLLTSDQTLLSSRATAKIVRENARHGKAWAKK
FTAAMVKMGYIDVLTGSKGEIRKNCRVVN*
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