Tc05v2_t023900.1

Overview
NameTc05v2_t023900.1
Unique NameTc05v2_t023900.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length537
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 13 Proteins
Productornithine decarboxylase-like
NoteOrnithine decarboxylase
Cross References
External references for this mRNA
DatabaseAccession
GeneID108662042
GenbankXM_018121087.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g023900Tc05v2_g023900Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p023900.1Tc05v2_p023900.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto301771auto301771Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto301772auto301772Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t023900.1 ID=Tc05v2_t023900.1|Name=Tc05v2_t023900.1|organism=Theobroma cacao|type=mRNA|length=537bp
ATGCATATTGTCGACATTGGTGGAGGTTTCACATCCGGTCCAAAGTTTGC
TGAAGCAGCCTCAGCCGTGAAAGTTGCTCTGCAAAAGTATTTTCCTAATG
GGCATGCTTCTGGCTTAAAAATTATGGCAGAACCTGGTCGTTTCATTGCT
AACGAGCCTTTCACATTAGCAACAAGCATTCTAGGGAAGCGAATTAGGAA
TGAGATTAAAGAGTATTGGATTAACGATGGGATGTCGGGGTCTATGAATT
ATTTGAAGTATGACCATGATGATGTGATTTGCACTCCTCTTGCCAACCAT
GGCAGCAACTACGTTATAACATGCAAAGGACTGAAGACAACCGATTCCAC
AGTGTTTGGACCAGCATGTGATCCGGATGATACGGTTTTGGAAGGTTACC
CGCTGCCAGATCTACAAGTTAATGATTGGCTGGTAATCCACAACATGGGC
GCTTACACCTCTTCTGGTGGGAATGATTTCAATGGGTTCAAAACATCAGC
CATTCCAACTTACGTTGGGAACTCTGATAAAAGTTAA
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protein sequence of Tc05v2_p023900.1

>Tc05v2_p023900.1 ID=Tc05v2_p023900.1|Name=Tc05v2_p023900.1|organism=Theobroma cacao|type=polypeptide|length=179bp
MHIVDIGGGFTSGPKFAEAASAVKVALQKYFPNGHASGLKIMAEPGRFIA
NEPFTLATSILGKRIRNEIKEYWINDGMSGSMNYLKYDHDDVICTPLANH
GSNYVITCKGLKTTDSTVFGPACDPDDTVLEGYPLPDLQVNDWLVIHNMG
AYTSSGGNDFNGFKTSAIPTYVGNSDKS*
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