Tc05v2_t023800.1

Overview
NameTc05v2_t023800.1
Unique NameTc05v2_t023800.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length846
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productprobable ribose-5-phosphate isomerase 3, chloroplastic
NoteProbable ribose-5-phosphate isomerase 3, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18600222
GenbankXM_007030541.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g023800Tc05v2_g023800Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p023800.1Tc05v2_p023800.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto301503auto301503Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto301504auto301504Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t023800.1 ID=Tc05v2_t023800.1|Name=Tc05v2_t023800.1|organism=Theobroma cacao|type=mRNA|length=846bp
ATGGCCTCCTTATCCCTCCAACTCTCCTCCCTGCACCACACCTCTGCCAC
GCCTCTGATCCTACGCAGCACCCCTCTCAACCGACGCCCCCCAACCCAGA
AACCGTTCTCCATCAGGGCCCAATCCGCCCCAGTCCTTTCCCAAGATGAT
CTCAAGAAACTAGCAGCGGACAAAGCAGTGGAGTCAGTCAAGTCGGGCAT
GATCCTAGGCCTAGGAACAGGCTCAACAGCTGCTTTTGTAGTTGACAAAC
TAGGCCAACTTCTTTCAACAGGTGAACTTTCTGACATCATAGGAATCCCA
ACCTCGAAAAGAACACAAGAACAAGCTGCATCACTTAACATCCCCTTAAC
TACCCTGAATAAGCATCCCCACATTGACCTTGCTATTGATGGTGCTGATG
AAGTTGATCCTAACCTTGACTTAGTTAAAGGCCGAGGAGGTGCACTTCTA
CGTGAAAAAATGGTTGAGGCAGCTTCATCTTCTTTCATTGTAGTAGCTGA
TGATAGTAAGCTTGTCTCAGGGCTTGGAGGGAGTGGCTTAGCTATGCCTG
TTGAAGTGGTGCAGTTTTGTTGGAAATATAATTTAGTTAGGCTTGAAGGG
TTGTTTAAAGATTTGGGTTGTGAAGCAAAGTTGAGGTTAGTAGGGGATGG
TAGTGAAAAGCCTTATGTAACTGATAATGGGAATTATATTGTGGATTTGT
ATTTTAAGAATCCAATCAAAGATGGATTTGGAGCTGGGAAAGAGATTTCT
GCCTTGGAAGGTGTAGTGGAACATGGGTTGTTTTTAGGGATGGCTACTTC
TGTTATTATTGCTGGGAAGACCGGTGTGGAGATTATGACTAAGTGA
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protein sequence of Tc05v2_p023800.1

>Tc05v2_p023800.1 ID=Tc05v2_p023800.1|Name=Tc05v2_p023800.1|organism=Theobroma cacao|type=polypeptide|length=282bp
MASLSLQLSSLHHTSATPLILRSTPLNRRPPTQKPFSIRAQSAPVLSQDD
LKKLAADKAVESVKSGMILGLGTGSTAAFVVDKLGQLLSTGELSDIIGIP
TSKRTQEQAASLNIPLTTLNKHPHIDLAIDGADEVDPNLDLVKGRGGALL
REKMVEAASSSFIVVADDSKLVSGLGGSGLAMPVEVVQFCWKYNLVRLEG
LFKDLGCEAKLRLVGDGSEKPYVTDNGNYIVDLYFKNPIKDGFGAGKEIS
ALEGVVEHGLFLGMATSVIIAGKTGVEIMTK*
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