Tc05v2_t022740.1

Overview
NameTc05v2_t022740.1
Unique NameTc05v2_t022740.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1029
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 52 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productserine/threonine-protein phosphatase PP1
NoteSerine/threonine-protein phosphatase PP1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18600080
GenbankXM_007030371.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g022740Tc05v2_g022740Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p022740.1Tc05v2_p022740.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto300103auto300103Theobroma cacaoexon
exon-auto300104auto300104Theobroma cacaoexon
exon-auto300105auto300105Theobroma cacaoexon
exon-auto300106auto300106Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto300107auto300107Theobroma cacaoCDS
CDS-auto300108auto300108Theobroma cacaoCDS
CDS-auto300109auto300109Theobroma cacaoCDS
CDS-auto300110auto300110Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t022740.1 ID=Tc05v2_t022740.1|Name=Tc05v2_t022740.1|organism=Theobroma cacao|type=mRNA|length=1029bp
ATGGAGCAAGGGATTCTTGATGATATTATAAATCGGCTTTTGGAAGTTCG
GGGTCGACCGGGGAAACAAGTGCAGCTATCGGAATCGGAGATCCGACAAC
TTTGTGTGGTGTCTAAAGATATTTTCTTACAACAACCTAATCTGTTGGAA
CTTGAAGCACCCATCAAGATATGTGGTGATATCCATGGTCAATATTCTGA
TCTTTTAAGGCTTTTTGAGTACGGTGGGTTGCCTCCGAATGCCAACTACT
TATTTTTGGGGGATTATGTTGATCGAGGCAAGCAAAGTCTGGAGGCAATA
TGTCTTCTTCTTGCTTACAAGATAAAATACCCTGAAAATTTTTTCCTCTT
GAGGGGTAACCATGAATGTGCTTCCATAAACCGCATATATGGTTTCTATG
ATGAGTGTAAGAGAAGATTTAATGTTAGGCTATGGAAGACATTCACAGAA
TGTTTTAACTGCCTACCAGTGGCAGCACTAATTGATGAGAAGATTCTGTG
CATGCATGGAGGCCTTTCTCCTGATCTGAATAATTTGGACCAGATTAGAA
GTTTACAGCGCCCAACTGATGTACCAGACACTGGTTTGCTTTGTGATCTT
CTCTGGTCTGATCCCAGTAAAGATGTGCAAGGTTGGGGAGTGAACGACCG
GGGAGTTTCATTTACTTTTGGTCCTGACAAGGTGTCAGAGTTTCTACAGA
AACATGACCTAGATCTCATTTGCCGTGCCCACCAGGTTGTGGAGGATGGA
TATGAGTTTTTTGCCAACCGACAACTTGTAACTATATTTTCAGCACCTAA
CTATTGTGGGGAGTTTGATAATGCTGGAGCCATGATGAGTGTGGACGAGA
CTTTGATGTGCTCCTTTCAAATATTGAAGCCTGTAGATAAGAAGTCAAAG
TTTAACTTCGGGAGCACAACTACAGCCAAGCCTGGGAACCCTTCAACAGG
AGTCTTTGGGAGCACTACCACAGCAAAGCCTGGAAACTCTCCGGCAGGAA
TCAAGTCATTTTTTGGTACAAAGGTATGA
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protein sequence of Tc05v2_p022740.1

>Tc05v2_p022740.1 ID=Tc05v2_p022740.1|Name=Tc05v2_p022740.1|organism=Theobroma cacao|type=polypeptide|length=343bp
MEQGILDDIINRLLEVRGRPGKQVQLSESEIRQLCVVSKDIFLQQPNLLE
LEAPIKICGDIHGQYSDLLRLFEYGGLPPNANYLFLGDYVDRGKQSLEAI
CLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTE
CFNCLPVAALIDEKILCMHGGLSPDLNNLDQIRSLQRPTDVPDTGLLCDL
LWSDPSKDVQGWGVNDRGVSFTFGPDKVSEFLQKHDLDLICRAHQVVEDG
YEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPVDKKSK
FNFGSTTTAKPGNPSTGVFGSTTTAKPGNSPAGIKSFFGTKV*
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