Tc05v2_t021780.1

Overview
NameTc05v2_t021780.1
Unique NameTc05v2_t021780.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length192
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productanaphase-promoting complex subunit 13, transcript variant X1
NoteAnaphase-promoting complex subunit 13
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599977
GenbankXM_018120765.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g021780Tc05v2_g021780Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p021780.1Tc05v2_p021780.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto297009auto297009Theobroma cacaoexon
exon-auto297010auto297010Theobroma cacaoexon
exon-auto297011auto297011Theobroma cacaoexon
exon-auto297012auto297012Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto297013auto297013Theobroma cacaoCDS
CDS-auto297014auto297014Theobroma cacaoCDS
CDS-auto297015auto297015Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t021780.1 ID=Tc05v2_t021780.1|Name=Tc05v2_t021780.1|organism=Theobroma cacao|type=mRNA|length=192bp
ATGGCAGAACTGAGCCTTGGTATACTTATAGATATTGTTGATGAAGAATG
GATGAGAGATACGCTGCCTGATGATGATCTTCCACTGCCAGCTGTAATGG
TTGCTCGAACTGATGATACTGAAGACTCAAATCAGGAGACTCAGCAAGTG
GATGGAAACACCTGGCATGATCTTGAATTAAGTACTCAATGA
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protein sequence of Tc05v2_p021780.1

>Tc05v2_p021780.1 ID=Tc05v2_p021780.1|Name=Tc05v2_p021780.1|organism=Theobroma cacao|type=polypeptide|length=64bp
MAELSLGILIDIVDEEWMRDTLPDDDLPLPAVMVARTDDTEDSNQETQQV
DGNTWHDLELSTQ*
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