Tc05v2_t021260.1

Overview
NameTc05v2_t021260.1
Unique NameTc05v2_t021260.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1503
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 44 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productpyruvate kinase, cytosolic isozyme
NotePyruvate kinase, cytosolic isozyme
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599910
GenbankXM_018121235.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g021260Tc05v2_g021260Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p021260.1Tc05v2_p021260.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto296306auto296306Theobroma cacaoexon
exon-auto296307auto296307Theobroma cacaoexon
exon-auto296308auto296308Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto296309auto296309Theobroma cacaoCDS
CDS-auto296310auto296310Theobroma cacaoCDS
CDS-auto296311auto296311Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t021260.1 ID=Tc05v2_t021260.1|Name=Tc05v2_t021260.1|organism=Theobroma cacao|type=mRNA|length=1503bp
ATGGAGAACGTGATTCTAACAGGAGTAGAGGGAATGGTGAGGCCAAAGAC
AAAGATCGTTTGCACCTTAGGGCCAGCTTCGAGGTCGGTTGAGATGATTG
AGAAGCTTTTGAAAGCTGGCATGAACGTCGCTCGTTTCAACTTCTCGCAT
GGTTCCCATGCATACCACCAGGAAACCTTGGACAATCTAAGGACTGCCAT
GAACAACACCTGCATTCCTTGTGCTGTCATGTTGGATACTAAGGGACCAG
AGATTCGAACTGGCTTTTTGAGGGATGGGAAGCCCATACAACTCACTCAG
GGTGAAAAGATTACTATTACCACTGACTATAGCATAAAGGGTGATGAGAA
TCTGATCTCCATGAGTTACAAGAAGTTGGCTGAAGATTTAAAGCCTGGGA
GCGTTATTTTGTGTTCCGATGGGACAATTACATTCACTGTCTTGGCTTGT
GACAAGGAATTGGGATTGGTCCATTGCCGTTGTGAGAACTCTGCAGTTCT
GGGTGAAAGGAAGAATGTCAATCTTCCAGGAGTTGTGGTTGATCTTCCAA
CCTTAACAGAGAAGGACAAAGAAGATATCCTGCAATGGGGTGTTCCAAAC
AAGATAGACATAATCGCCTTGTCTTTTGTTCGTAAAGGTTCAGACCTTGT
AGAGGTCAGAAAGCTGCTGGGAGAGCATGGAAATAGCATTATTCTCATGT
CAAAGGTTGAAAATCAAGAAGGAGTTGCTAATTTTGATGATATTCTAGCA
AATTCTGATGCATTTATGGTTGCAAGAGGTGATTTGGGAATGGAGATCCC
AATTGAGAAGATATTCCTGGCTCAGAAAATGATGATTATGAAGGCCAATA
AATTGGGAAAGCCTGTGGTAACTGCAACTCAGATGCTGGAGTCCATGATC
AAATCTCCGAGGCCAACTCGAGCTGAAGCTACCGATGTTGCCAATGCAGT
TCTCGATGGTACTGACTGTGTGATGCTAAGTGGAGAAACTGCTGCTGGAT
CCTACCCTGACCTTGCTGTTCAAACCATGGCCAGAATTTGCAAAGAGGCA
GAAAACTTTATAAACTATGGAGATCTTTTCAAGAGAATAATGGAAACTGC
ATCCACGCCTATGAGCCCATTAGAAAGTCTGGCTTCCTCAGCTGTGAGGA
CAGGCAATTGCATTAAAGCATCTATAATTTTGGTCCTAACCAGAACTGGA
ACCACAGCAAAGCTAGTGGCCAAGTATAGGCCAAGTATGCCTATTTTGTC
TATGATCATCCCAGAGATAACGACAGATTCCCTTGACTGGTCATGCAGTG
ATGAAGCTCCAGCAAGGCATTGCCTTATTTTCAGGGGTCTGATCCCTGTT
TTGAGCTCTGGCTCTGCAAAAGCTTCTTACAGTGAGTCTATTGAGGAAAC
AACCAAGTTTGCCCTTCAACATGCAAAGGAAAGAGGACTTTGCAAACCTG
GAGATTCAATTGTGGCATTGCACCCTTCAGTGATTAAGATTTTGACAGTT
TGA
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protein sequence of Tc05v2_p021260.1

>Tc05v2_p021260.1 ID=Tc05v2_p021260.1|Name=Tc05v2_p021260.1|organism=Theobroma cacao|type=polypeptide|length=501bp
MENVILTGVEGMVRPKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSH
GSHAYHQETLDNLRTAMNNTCIPCAVMLDTKGPEIRTGFLRDGKPIQLTQ
GEKITITTDYSIKGDENLISMSYKKLAEDLKPGSVILCSDGTITFTVLAC
DKELGLVHCRCENSAVLGERKNVNLPGVVVDLPTLTEKDKEDILQWGVPN
KIDIIALSFVRKGSDLVEVRKLLGEHGNSIILMSKVENQEGVANFDDILA
NSDAFMVARGDLGMEIPIEKIFLAQKMMIMKANKLGKPVVTATQMLESMI
KSPRPTRAEATDVANAVLDGTDCVMLSGETAAGSYPDLAVQTMARICKEA
ENFINYGDLFKRIMETASTPMSPLESLASSAVRTGNCIKASIILVLTRTG
TTAKLVAKYRPSMPILSMIIPEITTDSLDWSCSDEAPARHCLIFRGLIPV
LSSGSAKASYSESIEETTKFALQHAKERGLCKPGDSIVALHPSVIKILTV
*
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