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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 66 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns |
Product | beta-glucosidase BoGH3B, transcript variant X2 |
Note | Putative Beta-xylosidase/alpha-L-arabinofuranosidase 2 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc05v2_t020650.1 ID=Tc05v2_t020650.1|Name=Tc05v2_t020650.1|organism=Theobroma cacao|type=mRNA|length=1911bp ATGACAAGACCAAGATTGTTCATCTTCTTGATGGGACTTCTACTTTGTGG TTGCTTTGAAATCTCAGCAAAAGCAGAATATATGAAGTATAAAGATCCAA AACAGTCACTGCCTGTCCGAGTTCAGGACCTGTTGGACAGAATGACATTA GAGGAAAAAATAGGACAAATGGTCCAAATTGACCGCAAAGTTGCTTCAGC TGAGGTGATGAAGAAGTATTTCATCGGAAGTCTATTGAGTGGAGGAGGGA GTGTCCCAGCTCCACAAGCTTCTGCAAAGGCTTGGATTGACATGGTCAAT GAATTTCAGAAAGGTTGTTTATCTACCCGATTAGGAATTCCAATGATTTA TGGGATTGATGCTGTTCATGGCCACAACAATGTTTACAATGCAACAATTT TTCCTCACAACATTGGACTAGGAGCTACCAGGGACCCTGAACTAGTTAAG AAAATTGGGGCTTCAACAGCACTTGAAGTCAGAGCTACTGGCATTCCATA TGTTTTTGCACCTTGCATAGCGGTTTGCAGAGATCCAAGATGGGGTCGAT GTTATGAAAGTTACAGCGAAGATCCCGAGGTTGTTGAAGCAATGACAGAG ATTGTACCAGGATTACAAGGAGACATCCCTGCTAACTCTCCCAAGGGGGT TCCATTTGTGGCTGGACAGAAAAATGTTGCAGCTTGTGCTAAGCACTATG TAGGTGATGGTGGGACAACCCAGGGCATCAATGAGAACAACACTGTAATA GACAGGCATGGTTTGGTTAGCATTCACATGCCAGGCTACTATGCTTCTAT TATCAAAGGTGTTTCAACCATCATGGTCTCCTATTCGAGCTGGAATGGAA TTAAGATGCATGCTAATCGCGATTTGATCACCGATTTTCTCAAGAACACA CTTCGTTTCAGGGGTTTTGTCATCACGGATTGGGAAGGTCTTGACAGGAT CACATCTCCACCTCATGCTAACTATTCATATTCAATTCAAGTTGGAATCA AAGCTGGCATTGACATGGTCATGGTTCCATTCAACTATACAGAATTCATC GACGGGCTAACCTTCCAGGTGAAAAACAATATAATCCCCATGAGCCGCAT TAATGATGCAGTGATGAGAATTTTGCGAGTTAAGTTTGTAATGGGTCTAT TCGAGAACCCACTAGCAGATTACAGCTTGGTCGACCAACTTGGAAGTCAG GAGCATAGAGAGTTGGCTAGAGAAGCAGTGAGAAGATCACTTGTTTTGCT AAAGAATGGACAATCTACCGATCATCCATTGCTTCCCCTACCCAAGAAGA CTTCGAAAATACTAGTTGCCGGTAGTCATGCAGATAATTTGGGTTATCAA TGCGGTGGATGGACAATTGAGTGGCAGGGCTTGAGCGGCAACAACCTCAC AAGCGGAACAACAATCCTGACAGCTGTCAAGAACACAGTTGATTCAAGCA CCAAAGTCGTATACAAGAAGAATCCCGACACTGAATTCGTCAAGTCCAAC GATTTCTCATACGCCATTGTGGTAGTAGGGGAGCATCCATATGCAGAAAC ACAAGGCGACAGCATGAATTTGACAATTGCAGACCCTGGCCCAAGCACAA TCACAAATGTCTGCGGAGCTGTGAAATGTGTTGTTATCATCATATCCGGT CGCCCTGTCGTCATCCAGCCATTTATTAACTCTATCGATGCTGTCGTCGC CGCTTGGCTCCCAGGAACTGAGGGCCAAGGTGTTGCTGATGTTCTGTTTG GTGACTATGGTTTTACAGGCAAGCTTCCTCGTACTTGGTTCAAGACTGTT GATCAACTGCCGATGAATATCGGGGATCCACATTATGACCCTCTCTTCCC GTTTGGGTTTGGCCTTACTACAGAACCTTCAAATGAGCAAATCACTTCTA AGGACTTCTAA back to topprotein sequence of Tc05v2_p020650.1 >Tc05v2_p020650.1 ID=Tc05v2_p020650.1|Name=Tc05v2_p020650.1|organism=Theobroma cacao|type=polypeptide|length=637bp
MTRPRLFIFLMGLLLCGCFEISAKAEYMKYKDPKQSLPVRVQDLLDRMTL EEKIGQMVQIDRKVASAEVMKKYFIGSLLSGGGSVPAPQASAKAWIDMVN EFQKGCLSTRLGIPMIYGIDAVHGHNNVYNATIFPHNIGLGATRDPELVK KIGASTALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPEVVEAMTE IVPGLQGDIPANSPKGVPFVAGQKNVAACAKHYVGDGGTTQGINENNTVI DRHGLVSIHMPGYYASIIKGVSTIMVSYSSWNGIKMHANRDLITDFLKNT LRFRGFVITDWEGLDRITSPPHANYSYSIQVGIKAGIDMVMVPFNYTEFI DGLTFQVKNNIIPMSRINDAVMRILRVKFVMGLFENPLADYSLVDQLGSQ EHRELAREAVRRSLVLLKNGQSTDHPLLPLPKKTSKILVAGSHADNLGYQ CGGWTIEWQGLSGNNLTSGTTILTAVKNTVDSSTKVVYKKNPDTEFVKSN DFSYAIVVVGEHPYAETQGDSMNLTIADPGPSTITNVCGAVKCVVIIISG RPVVIQPFINSIDAVVAAWLPGTEGQGVADVLFGDYGFTGKLPRTWFKTV DQLPMNIGDPHYDPLFPFGFGLTTEPSNEQITSKDF* back to top
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