Tc05v2_t019770.1

Overview
NameTc05v2_t019770.1
Unique NameTc05v2_t019770.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1860
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
ProductUTP--glucose-1-phosphate uridylyltransferase
NoteUTP--glucose-1-phosphate uridylyltransferase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599737
GenbankXM_018122138.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g019770Tc05v2_g019770Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p019770.1Tc05v2_p019770.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto292944auto292944Theobroma cacaoexon
exon-auto292945auto292945Theobroma cacaoexon
exon-auto292946auto292946Theobroma cacaoexon
exon-auto292947auto292947Theobroma cacaoexon
exon-auto292948auto292948Theobroma cacaoexon
exon-auto292949auto292949Theobroma cacaoexon
exon-auto292950auto292950Theobroma cacaoexon
exon-auto292951auto292951Theobroma cacaoexon
exon-auto292952auto292952Theobroma cacaoexon
exon-auto292953auto292953Theobroma cacaoexon
exon-auto292954auto292954Theobroma cacaoexon
exon-auto292955auto292955Theobroma cacaoexon
exon-auto292956auto292956Theobroma cacaoexon
exon-auto292957auto292957Theobroma cacaoexon
exon-auto292958auto292958Theobroma cacaoexon
exon-auto292959auto292959Theobroma cacaoexon
exon-auto292960auto292960Theobroma cacaoexon
exon-auto292961auto292961Theobroma cacaoexon
exon-auto292962auto292962Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto292963auto292963Theobroma cacaoCDS
CDS-auto292964auto292964Theobroma cacaoCDS
CDS-auto292965auto292965Theobroma cacaoCDS
CDS-auto292966auto292966Theobroma cacaoCDS
CDS-auto292967auto292967Theobroma cacaoCDS
CDS-auto292968auto292968Theobroma cacaoCDS
CDS-auto292969auto292969Theobroma cacaoCDS
CDS-auto292970auto292970Theobroma cacaoCDS
CDS-auto292971auto292971Theobroma cacaoCDS
CDS-auto292972auto292972Theobroma cacaoCDS
CDS-auto292973auto292973Theobroma cacaoCDS
CDS-auto292974auto292974Theobroma cacaoCDS
CDS-auto292975auto292975Theobroma cacaoCDS
CDS-auto292976auto292976Theobroma cacaoCDS
CDS-auto292977auto292977Theobroma cacaoCDS
CDS-auto292978auto292978Theobroma cacaoCDS
CDS-auto292979auto292979Theobroma cacaoCDS
CDS-auto292980auto292980Theobroma cacaoCDS
CDS-auto292981auto292981Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t019770.1 ID=Tc05v2_t019770.1|Name=Tc05v2_t019770.1|organism=Theobroma cacao|type=mRNA|length=1860bp
ATGACGATCCATTCAGTAGTAATCCAGAAACTCTTAACAACAAATTCCCA
CATCAGCCGACAAACAGTAACCCACCATTTCAAACAATTTACCTACGGAA
TCCGAAACAAGCAAGCCATCCTCGATTCTGACAAGACCCTAATCTGCCTC
CGCAATGCTCTCAACTTCATCACGTGCCTCTCACGTGACCCATCTTCCTC
TTTCCTCTTCATCAACACCAACCCTCTTTTCCAACCCATAATCGACGAGA
TGACCTTGAAAGTGACAACCTTCAATCCTGAAAGGGTAAGCAACCTTTGG
AAGATGCGTGGATTTTTGACCAACAGTTTCAGTCCTAAGAAGTTTCGGTC
TAGGAATAAGAAACTAGTTTTTGGGCCGACTAGGTTGCCTGATTGTGTTG
TGGTTTTTGATACTGAGAGGAAAAGTTCGATTTTGTCGGAAGCGGAAAGG
TTGGGGATTCCGATAGTTGGGTTGGTTGATTCGAGTACGCCGTTGGAGTT
TTATAAGAAGGTTACTTATCCAATACCGGCTAATGATTCTGTTCAGTTCG
TTTATTTGGTTTGTAATATGATTACTAAGTGTTTAATGTTGGAGAAGAAG
AAAAAAGAGGGAGAAAAGAGGATTGGGAGGAAGGCTACAAGTAGGGAAGA
AGTTAAGCAAATTGAAGAGAGCACTGGTGAGAGCAAGGTGGAAAGTGCAA
ATGAAGTGCTTGTCATTCCCTATGATAACTTAGCACCTCTTTCTGGGGAT
ATTGCAGACATGAAGCAGCTTTTAGACAAGCTTGTTGTGGTGAAGTTCAA
TGGAGCTTTGGGAAAAAATATGGGTTTCAATGGTCCCAAGTCTTTGATTG
AAGTTAAAAATGGGTCAACATCTCTGGACTTAACTGTTAACCAAATTCAG
TCGCTAAATTCCAAGTATGGATGCAATGTTCCTCTGCTTCTGATAAACTC
AAGGACAACACACGATGATGTCTTAAAGGTTTTGGAGAAATATTCCAGCT
CAAAGATAGATATACATTCTTTTAGACAGGGGGACCAAATTCAACAGGAG
TTATCTTTCAGTGAGGGCGGTGAGGATGAATGGTATTCTTCTGATCATGG
TGCTCAATTCCTTTCCCTCATGAGTAGTGGAACTCTTGATGTATTACTTT
CCCAGGGTAAGGAGTATGCCCTTGTGGTGAACCCTGATAACGTGGCTGCT
GTTGTGGACCCAAAAATCTTGAACCATTTGGCCCAAAACAGTGTTGAATA
CTGTATGGAGGTGATGCCAACCACCTCAGGTGGTTTGATGAACTTTATGG
CTAGTTCACTCCAAGGAAAGTTTAAGCTTGAAGACTTCACTTCAAATCCT
ACTAAACATTCGGTGAAAAAGTTCAAATTCATTGATACAAGAAACTTGTG
GGTAGATTTGAGAGCCATTAAAAGGCTTGTAGATACTAATGCACTGAAGT
TGGGCTACCTTTCTATGTTAAAGTTATTTGAAAAAGCAATTGGCATTATG
ATTCCTCAATCTCGTTTTCCTCCATTAAATTCCACATCAGACTTACTTCT
TTTCCAGTCGGACCTTTACTCATTTACCGAAGGCGTTTTAATTCGAAATG
ATGCTAGGACTACTCCTACTAACCCTTCCATTGATTTAGGACCGGAATTT
GAAAAGGTTAGCGATTTCCAAAGTCGCTTTAAAACCATTCCTAGCATTAT
TAGGCTGGATAGCTTGGAGGTGACTGGTGATGTTTGGTTTGGCGCTGATA
TAACTCTCAAGGGGAGAGTTAGAATTGCTGCAGACCCTGGAGTGAAATTG
GAAATTCCTGATGGAGTCGTGCTTAAGAATGAGGAGATCAAAGACCCCAG
AGACATTTAA
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protein sequence of Tc05v2_p019770.1

>Tc05v2_p019770.1 ID=Tc05v2_p019770.1|Name=Tc05v2_p019770.1|organism=Theobroma cacao|type=polypeptide|length=620bp
MTIHSVVIQKLLTTNSHISRQTVTHHFKQFTYGIRNKQAILDSDKTLICL
RNALNFITCLSRDPSSSFLFINTNPLFQPIIDEMTLKVTTFNPERVSNLW
KMRGFLTNSFSPKKFRSRNKKLVFGPTRLPDCVVVFDTERKSSILSEAER
LGIPIVGLVDSSTPLEFYKKVTYPIPANDSVQFVYLVCNMITKCLMLEKK
KKEGEKRIGRKATSREEVKQIEESTGESKVESANEVLVIPYDNLAPLSGD
IADMKQLLDKLVVVKFNGALGKNMGFNGPKSLIEVKNGSTSLDLTVNQIQ
SLNSKYGCNVPLLLINSRTTHDDVLKVLEKYSSSKIDIHSFRQGDQIQQE
LSFSEGGEDEWYSSDHGAQFLSLMSSGTLDVLLSQGKEYALVVNPDNVAA
VVDPKILNHLAQNSVEYCMEVMPTTSGGLMNFMASSLQGKFKLEDFTSNP
TKHSVKKFKFIDTRNLWVDLRAIKRLVDTNALKLGYLSMLKLFEKAIGIM
IPQSRFPPLNSTSDLLLFQSDLYSFTEGVLIRNDARTTPTNPSIDLGPEF
EKVSDFQSRFKTIPSIIRLDSLEVTGDVWFGADITLKGRVRIAADPGVKL
EIPDGVVLKNEEIKDPRDI*
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